CI01000310_01887698_01893727 (CX23, GJE1)


Basic Information

Item Value
gene id CI01000310_01887698_01893727
gene name CX23, GJE1
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000310
NCBI id null
chromosome length 5141163
location 1887300 ~ 1893840 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000310_01887698_01893727.mRNA
ATTTATAAGCCTGTTTTGAGAACATCAGCTGTTGCATTTGTTTTATTGCCATGTCGTGGTTTCTTTAATTTACTTTATGTCTTACACTCATTGTGTTTTTGTCAGCTGTTCCCCCATTATGCCTCAAAAGGCCTGTTTTTTTCTGCTGACGTAGTTGAATGGGGATTATGTGAGGAGCACATGTCCAGTCCTTTTGTTTTTGCCTTTTTGTTGTCTTTTTGTACCTCATGGGAAAATCGATGAAGGTAGAGCAGATGAAAGGGAAATATGCATTGACGGGAGCTGCACAGGTCAACAAGAACAGCAGTGTTTGAGCTGGAGCTCAGCAGAAGGTAACAGGTCTGAAATGAGGGCAAAGCATTACAGACTATTTGAACTAAAAGAAAAAAGACATTATCATGTCCTTAAACTACATCAAGAACTTCTATGAGGGATGCCTCCGGCCTCCAACTGTGATTGGTCAATTCCACACCCTGTTTTTTGGCTCTGTGCGCATGTTCTTCCTGGGTGTTCTGGGATTTGCGGTTTATGGGAATGAGGCCCTTCACTTTAGCTGTGACCCCGACAGAAGAGAGATCAACCTCTTCTGTTACAATCAGTTCAGACCTGTAACGCCTCAGGTGTTTTGGGCCCTGCAGCTAGTGACGGTTCTTGTTCCAGGGGCTGTGTTTCATCTGTATGCCGCCTATAAAAACATAAATCAAGAGGATATTCTAGAAAAACCAAAGTACACAGTGTTCTACATCATTTCTGTACTATTACGAATTGTCCTGGAGATGGCAGCATTCTGGCTCCAGAGTCGCCTCTTTGGATTCCTGGTTCATCCTCTGTACTTCTGTGACGCCAGTTCACTGGAGAAGACATTTAACTTCACCAAGTGTATGGTACCGGAGCACTTTGAAAAGACCATCTTCCTCAGTGCAATGTACATTTTCACCATTATCACCTTGATTCTGTGTATGGCTGAGATTTTTGAAATCCTCTGCAGAAGGCTGGGCTATTTAACAAATCAATCACAATCGTAAACTTGAGAATAACAGACAAAAGAATGCAAATGTAAAAGAATCATTTTCATTTAATCAAATATGATTGCATGGCATCCATCCAGGTGTTTACATTATTCTCTACCTCACTGTGA

Function

symbol description
gje1 Enables gap junction channel activity. Predicted to be involved in cell-cell signaling. Predicted to act upstream of or within cell communication. Predicted to be located in plasma membrane. Predicted to be integral component of membrane. Predicted to be part of connexin complex. Is expressed in solid lens vesicle. Orthologous to human GJE1 (gap junction protein epsilon 1).
cx23 gap junction epsilon-1 protein

NR:

description
unnamed protein product

GO:

id name namespace
GO:0005243 gap junction channel activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000310_01887698_01893727.mRNA True 1138 mRNA 0.42 3 1887300 1893840

Neighbor

gene id symbol gene type direction distance location
CI01000310_01814975_01815586 DUS23, DUSP23B, DUSP23, TP53I3 coding upstream 71644 1814975 ~ 1815656 (+)
CI01000310_01737635_01745606 CHRNA2A, CHRNA2 coding upstream 141613 1737635 ~ 1745687 (+)
CI01000310_01723036_01723254 NA coding upstream 163750 1723036 ~ 1723550 (+)
CI01000310_01693209_01696414 NA coding upstream 190429 1692729 ~ 1696871 (+)
CI01000310_01674884_01675180 NA coding upstream 212035 1674244 ~ 1675265 (+)
CI01000310_01941915_01945313 TATDN3 coding downstream 48075 1941915 ~ 1945642 (+)
CI01000310_01947567_01956704 ADCK3 coding downstream 53727 1947567 ~ 1956760 (+)
CI01000310_01981356_01982015 NA coding downstream 87135 1980975 ~ 1982224 (+)
CI01000310_01992187_02003475 SLC5A6B coding downstream 97800 1991640 ~ 2003475 (+)
CI01000310_02017340_02026116 NA coding downstream 123500 2017340 ~ 2026116 (+)
G439790 NA non-coding upstream 24986 1861838 ~ 1862314 (+)
G439788 NA non-coding upstream 31100 1855802 ~ 1856200 (+)
G439760 NA non-coding upstream 65035 1820365 ~ 1822265 (+)
G439764 NA non-coding upstream 68041 1818893 ~ 1819259 (+)
G439776 NA non-coding upstream 108468 1774347 ~ 1778832 (+)
G439842 NA non-coding downstream 868 1894708 ~ 1896961 (+)
G439841 NA non-coding downstream 3720 1897560 ~ 1898250 (+)
G439843 NA non-coding downstream 5526 1899366 ~ 1903564 (+)
G439844 NA non-coding downstream 10929 1904769 ~ 1905180 (+)
G439846 NA non-coding downstream 12125 1905965 ~ 1906387 (+)
CI01000310_01508712_01511125 FAM167A other upstream 373959 1508341 ~ 1513341 (+)
CI01000310_01207513_01226750 CDC5L other upstream 647895 1207057 ~ 1227194 (+)
G439115 NA other upstream 1196108 651976 ~ 653356 (+)
CI01000310_00648731_00650082 NAPB other upstream 1237747 648566 ~ 650159 (+)
G439845 NA other downstream 17761 1911601 ~ 1912417 (+)
G440505 NA other downstream 1205577 3099417 ~ 3136328 (+)

Expression


Co-expression Network