| Item | Value |
|---|---|
| gene id | XLOC_012935 |
| gene name | NA |
| gene type | non-coding |
| species | zebrafish (Danio rerio) |
| category of species | model fish |
| Item | Value |
|---|---|
| chromosome id | NC_007129.7 |
| NCBI id | CM002902.2 |
| chromosome length | 51023478 |
| location | 34942728 ~ 35038409 (+) |
| genome version | GRCz11_2017_zebrafish_Genome |
| id | name | namespace |
|---|---|---|
| GO:0022402 | cell cycle process | biological_process |
| GO:0042773 | ATP synthesis coupled electron transport | biological_process |
| GO:0042775 | mitochondrial ATP synthesis coupled electron transport | biological_process |
| GO:0006119 | oxidative phosphorylation | biological_process |
| GO:0006120 | mitochondrial electron transport, NADH to ubiquinone | biological_process |
| GO:0006139 | nucleobase-containing compound metabolic process | biological_process |
| GO:0022900 | electron transport chain | biological_process |
| GO:0022904 | respiratory electron transport chain | biological_process |
| GO:0006725 | cellular aromatic compound metabolic process | biological_process |
| GO:1901360 | organic cyclic compound metabolic process | biological_process |
| GO:0051276 | chromosome organization | biological_process |
| GO:0051301 | cell division | biological_process |
| GO:0046483 | heterocycle metabolic process | biological_process |
| GO:0045333 | cellular respiration | biological_process |
| GO:0032991 | protein-containing complex | cellular_component |
| GO:0005634 | nucleus | cellular_component |
| GO:0030289 | protein phosphatase 4 complex | cellular_component |
| GO:0043227 | membrane-bounded organelle | cellular_component |
| GO:0043231 | intracellular membrane-bounded organelle | cellular_component |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TCONS_00027131 | False | 4544 | lncRNA | 0.39 | 2 | 34942728 | 35038409 |
| TCONS_00027132 | False | 4405 | lncRNA | 0.39 | 3 | 35018332 | 35038409 |
| TCONS_00027133 | True | 4452 | lncRNA | 0.39 | 2 | 35033770 | 35038409 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| XLOC_012934 | LO018333.1 | coding | upstream | 7550 | 34861568 ~ 34935178 (+) |
| XLOC_012933 | CR626874.1 | coding | upstream | 105920 | 34667486 ~ 34836808 (+) |
| XLOC_012932 | tiparp | coding | upstream | 300642 | 34599315 ~ 34642086 (+) |
| XLOC_012931 | kcnab1a | coding | upstream | 406661 | 34362608 ~ 34536067 (+) |
| XLOC_012930 | vmn2r1 | coding | upstream | 700170 | 34225520 ~ 34242558 (+) |
| XLOC_012936 | AL935279.1 | coding | downstream | 34567 | 35072976 ~ 35074637 (+) |
| XLOC_012937 | NA | coding | downstream | 37006 | 35075415 ~ 35075774 (+) |
| XLOC_012938 | si:ch211-195m9.3 | coding | downstream | 90276 | 35128685 ~ 35148310 (+) |
| XLOC_012939 | cfap45 | coding | downstream | 135274 | 35173683 ~ 35197599 (+) |
| XLOC_012940 | tbrg1 | coding | downstream | 190706 | 35229115 ~ 35251377 (+) |
| XLOC_012928 | NA | non-coding | upstream | 894061 | 34028272 ~ 34048667 (+) |
| XLOC_012923 | CU463109.2 | non-coding | upstream | 1195613 | 33735335 ~ 33747115 (+) |
| XLOC_012922 | NA | non-coding | upstream | 1211113 | 33725576 ~ 33731615 (+) |
| XLOC_012918 | CR405715.1 | non-coding | upstream | 1315878 | 33622917 ~ 33626850 (+) |
| XLOC_012909 | BX649633.1 | non-coding | upstream | 1498471 | 33443264 ~ 33444257 (+) |
| XLOC_012942 | NA | non-coding | downstream | 392597 | 35431006 ~ 35431848 (+) |
| XLOC_012944 | CR377223.1 | non-coding | downstream | 768439 | 35806848 ~ 35806966 (+) |
| XLOC_012945 | CR377223.2 | non-coding | downstream | 781040 | 35819449 ~ 35819563 (+) |