G444658


Basic Information

Item Value
gene id G444658
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000313
NCBI id null
chromosome length 2068795
location 345557 ~ 350841 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU510439
GCTCTGTAGTTTCCAGGTGCGTGTGTGTTGTGCTGCGTCGCCATGGTGCTGCTGGTGAAGGTGTTGTGGATGCCGCCTTTGTTGCTGTTCCTGCTGCACCTCCACCCAGCAAGGGGGCACTGTTGCGGAGAAGCGCGGCGTCAGCGTTTCAAAACGTGTTAGTTCCACCAGAGAAGAAAGTGTCTCTGCGGTTAATGGCTGGTCCACCAGGAGGTCAACTCCTGTGATTCCTGGGCTCGAAGGATTCGATGTGGGTTTTGCTCCGTCCAGTAGTTGCTCCGCCCTATTAGATAGGGGGCCGTCGACAAAAATGTCGGCATCATCGATATCATCACACACACCTCCAATTTGAAGGAAATGAAGCTCTCCACCTTTTGTGCAGGCACACAGCCGGTCGGTGCCTGAGCAGTAGGTAACAGAGACGAAGGGGTCCACCTCCTCTGTCCCCTCTTTCTTAGGTGGCTCCACTTTTGCCAGCACCTCTAGAGTGGACAAGTCCAGAATCATGATGTAACCCGCCTGTGTAGTCACCACCAGGTGTCCAAGTCCGGCCACCTCTCCTCTCTTCTCCTTCCCAGTGGCTGATCCCAAACTTGGGCCAGCTGTCACTGCGGACGCCACTGTCCCCGTGCCATTTTTGAGCCCAGAGGGTGTCGACTCCTCGGACGTTTCCTCTCCGTCATCCTCTCTGCCATCTAGCACATCTGGTGGCAAGAGGAGGAGAGATGTAACGGCATCTCGTGGATCACGAATCTGCTGCACCTTCACCGGTTCCTCCTCCAGGGTTACGATGCGGGTGGAGTAATTTAACTTGTAGAGCGCAAGGTATCCGCCACCACCACTGCCCCCCAGAGGCCTGGAAGTATGGGGCTGTTGCTGGTCATGAGGGGGCAGAATGAGTGGGGTCTGTGGAGGAGAGGTGCCCGAGTGGGCGTCATGGCCATTGGCCAGTGTCTGTCCTTTGCGATGACCACAGAGGGCCGAGTGCAGACGGTTGAGGGTGTTTAACACCTCCACCTGATTGATAGCACTAAGGGACTCTACGGAGCATGGTTGAAGACCGACTAACAAGTGTAAGCCATCGCTGCAGGGCGTGATGGAGTCCACATACAGGTTCTCTTCCTCTAATGCTTTCGGCAACCGCAAGCACTGCACCAGAGAGCCCGGCCGTGGAGCCAGTGAGCTCCACTTTTCCCCATCCAGAGGTCCGAGCCCAGCCGCCGCATCCGCAAACTGCTGGATGTATGTGATGGGAGGGTCCTGCAGCAGCAGCTGCTCATGCGAGTCAAACTCCATCTCGATAATCTGCGGGACGGTGAAGCCCTCCTCGTGAAGCCCTTTGCTCATCAGGTTGTTCATCTGGGTGAACACCTTCCCTGAAGACTTCTCGTCTGCTTCCTTGATGCTGTACAGGAGCAGTACGGGCATAGTCCTGTGCACAGGGGTGGCTGGTGGAAGGTTCGGAGAGCCCAGGTCTGTGGGGGGATTACAGGACTCGATTTCCATGGGACCCTGGTCTGGTCCAAGCCCCTCGGGGGCAGCAGTCCTTACTGGGCTATCCATGGAGCGACGAGATAGAGGGGGGCCTAGTGGAGAACTAGCCGCTGACCGGTAGCTTAGCAGTCCGCCGGCCAACAGGCAGGGGAAGGGAATGTTGTGGTGCTCAGTCTGCCTATCCTTAGCCTTGTCAGCTTTAGGGGGGCCCAGTGAGTGCGGGGGGTTGGCCCCCAGCTCCTCCAGGTCTTTAACCGTGTCCTCCAGCACACTGGCCACCACCTCCCACTGTAACTTCTCAGGCTGCTGTAGGACACTGAGAGCTGTGACTCCCAAACTCACCTCCATCGTCTCCTTCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU510439 True 1853 lncRNA 0.57 3 345557 350841

Neighbor

gene id symbol gene type direction distance location
CI01000313_00311563_00321609 NA coding downstream 23948 311472 ~ 321609 (-)
CI01000313_00294667_00301218 NA coding downstream 44339 294104 ~ 301218 (-)
CI01000313_00117452_00118526 NA coding downstream 227031 116594 ~ 118526 (-)
CI01000313_00028124_00047785 MRPS5 coding downstream 297772 27846 ~ 47785 (-)
CI01000313_00016648_00018929 NA coding downstream 326150 16370 ~ 19407 (-)
CI01000313_00698894_00703473 FAM98A coding upstream 348053 698894 ~ 703473 (-)
CI01000313_00713063_00727810 NA coding upstream 362165 713006 ~ 727810 (-)
CI01000313_00819117_00821323 PCGF5A coding upstream 467976 818817 ~ 821474 (-)
CI01000313_00822941_00823338 NA coding upstream 471618 822459 ~ 823338 (-)
CI01000313_00897217_00899112 NA coding upstream 545158 895999 ~ 899207 (-)
G444692 NA non-coding downstream 21262 323329 ~ 324295 (-)
G444605 NA non-coding downstream 85343 255617 ~ 260214 (-)
G444617 NA non-coding downstream 143367 182864 ~ 202190 (-)
G444612 NA non-coding downstream 169273 175166 ~ 176284 (-)
G444606 NA non-coding downstream 174883 168851 ~ 170674 (-)
G444740 NA non-coding upstream 79634 430475 ~ 430722 (-)
G444741 NA non-coding upstream 80551 431392 ~ 431624 (-)
G444799 NA non-coding upstream 191236 542077 ~ 544074 (-)
G444812 NA non-coding upstream 340711 691552 ~ 693656 (-)
G444892 NA non-coding upstream 377780 728621 ~ 728876 (-)
G444653 NA other upstream 20679 371520 ~ 373464 (-)
G444714 NA other upstream 46766 397607 ~ 400096 (-)
CI01000313_00982839_00997272 NA other upstream 636173 982829 ~ 997590 (-)

Expression


Co-expression Network