G444812


Basic Information

Item Value
gene id G444812
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000313
NCBI id null
chromosome length 2068795
location 691552 ~ 693656 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU510617
TTATTGTCATTTATTATGGCAGTAAATATCAGCAGTTACAATGACGAAAACAACTTAAATACAAGAATTCTACAGAAATTATGCATATTCCTATGATGCAGTGTGATTGTGACATGCTTAGAAATACAGTGGCCACATGGGGGCGATAGACATCAATTTTTTTTCTATTTTAATTACTTGCAAAATGGGGCAAAATCTAAACATGTCAGTCACATAATCACAGTTTAAAACCAGTCATTAGGAAACATTAAATACAAACTAAAAGTTTGTTTTTTACAGACAATGGAAGTTTTGAATGGTCCATGCTAGAGTAGTGTTTTATTAATGTTTTCCCAATTACAGCAATGAATTCTAACAGTGCGATAAAGGACTCATGGAACATTTCTACACGTTATGTATTCAATTATCTCATTCCAGTTAAAGCAGGCTAAGTTCAAATCTAAATCCAGTTTTATCTTTAAAACTATAAATACTTTTAATATATTTACTTGTCAGACATAGTTTTCCAGCTAACATTACATAAATGTTTTCCAAATATTCCAGTCAAGATGGTGAAAGTCCCTTGATGTTTAATATTCAATTTTATGGGGCAAGCTTATGTTCACTGGCAACCCTGAGATGACCCGCTCACTGCACACACCTTATTTCAGCAAAAACCTTACATGAATTAGATTGCTTACAATTTTCTATACATACTGTTCAGAAATTTAATGAGACCCTTGGGGAAGAAACATATGTCTGTGTTTATTGTTAAATACGTAGTTGAAATGATTAAAATAAGAACTTTGTGAAAATAGGCTTACAGCATAAATGCACACCTTTTCCTCAAGTAGACCTGGCTGGCATCAACTATAAGCATGACCAGAAACATTCATATCACTACAGTCAATACAGTAATGACAGGGTTGATCATTTCACAGCAGTAATTACGGGCCATAACCTCTGATGGCCCGGAGGTGGCAAGAGTCTCCAGTTTTTAAATGCACGTCTCTTGAGTTTGCAAAGCGTAAAGATCTTTGCACAAGAAATTGTGCTGCTGCTCATAAGTCAAATAATGTGTGCCCATGCGCAATGATTTGGTCAAATGATATTTAAAACACCTAAGCAGTAAAACTCACCTATCAATAAGTGAAAGACAACATCTCCCACAGGAGGTTTCTGTAATCTAAGGCTCTGAAAGTCATGCTTACATTTTTAACATAAAAAAAAAAGAAAGATATTTTGAAGGCTGATGATTTTGGTACCTGTTGACTTGCATTGCATTTCTCAAAATACCATCTTTTATTTTCCACAGAAAAAATAAAGTCATACAGGTTTGGAACAACATGAGGGTGAGTAAATGATGACAGAATTGTCATTTTTGGGTAAACTGTCCCTTTAAGCTGTACACTTTATATGCTGCATCAGAGGTGTTCGGTCCAGCTCCTGGAGGGCCACTGTCCTGCAGTTCAGTTCCAACCCCACACCTGAACCAGCTAATCACAGTCTTACTAGAAATGTTCAGGCAGGTGTAAGGCAAGTTAGAGCTGAACTCTGCAGGACAGTGGCTCTCCAGGACCGAGATTGGACACCTCTGTGCTATATCAAATGATAATTTTGCACATGAGTTTAACACCTCTCCTGATCTCTGACAAAATTAAAATACTGAGAAGCACTACAGATGCACACGCATCATTGTATCAGACATATACAGATGAGAGCAGAATCAATAGCACAGTATTAGAATACTCTAAGGAGAATGACATTGGCAACAGAGAAGCGCTCACAGTAGTACACATGAAGGCTTCAGGATATCATTATCATGAGCCACTAGCATCTAAACATTCATTCTGTAATCATTTATTTCCTCACATGACTGTTTTTTTTTTTTGTGATGACGTTTTTTGAGCTGCTCTCTTCTATACAATGAAAGTCAATGGAAATCAACAACTGCTCAAGCTCCAAAGAATATAGACAAAAAACACCATACTTGTCCATACAACTTGTGTCAATCTGTCTAAAAGGGATAGTTCACCCCAAAATGAAAATTCTGTCATGATTTACTCACCCTCAAGTTGTTCCAAACCTGTATAAATTCCTTTGTTCTGCTGAACACAAAGGAAGAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU510617 True 2105 lncRNA 0.36 1 691552 693656

Neighbor

gene id symbol gene type direction distance location
CI01000313_00311563_00321609 NA coding downstream 369943 311472 ~ 321609 (-)
CI01000313_00294667_00301218 NA coding downstream 390334 294104 ~ 301218 (-)
CI01000313_00117452_00118526 NA coding downstream 573026 116594 ~ 118526 (-)
CI01000313_00028124_00047785 MRPS5 coding downstream 643767 27846 ~ 47785 (-)
CI01000313_00016648_00018929 NA coding downstream 672145 16370 ~ 19407 (-)
CI01000313_00698894_00703473 FAM98A coding upstream 5238 698894 ~ 703473 (-)
CI01000313_00713063_00727810 NA coding upstream 19350 713006 ~ 727810 (-)
CI01000313_00819117_00821323 PCGF5A coding upstream 125161 818817 ~ 821474 (-)
CI01000313_00822941_00823338 NA coding upstream 128803 822459 ~ 823338 (-)
CI01000313_00897217_00899112 NA coding upstream 202343 895999 ~ 899207 (-)
G444799 NA non-coding downstream 147478 542077 ~ 544074 (-)
G444741 NA non-coding downstream 259928 431392 ~ 431624 (-)
G444740 NA non-coding downstream 260830 430475 ~ 430722 (-)
G444656 NA non-coding downstream 335503 339368 ~ 356049 (-)
G444658 NA non-coding downstream 340711 345557 ~ 350841 (-)
G444892 NA non-coding upstream 34965 728621 ~ 728876 (-)
G444909 NA non-coding upstream 82349 776005 ~ 776206 (-)
G444813 NA non-coding upstream 255797 949453 ~ 951138 (-)
G444834 NA non-coding upstream 257912 951568 ~ 958369 (-)
G444954 NA non-coding upstream 271691 965347 ~ 965903 (-)
G444714 NA other downstream 291456 397607 ~ 400096 (-)
G444653 NA other downstream 318088 371520 ~ 373464 (-)
CI01000313_00982839_00997272 NA other upstream 293358 982829 ~ 997590 (-)

Expression


Co-expression Network