CI01000320_00235265_00237642


Basic Information

Item Value
gene id CI01000320_00235265_00237642
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000320
NCBI id null
chromosome length 3894707
location 235265 ~ 237642 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000320_00235265_00237642.mRNA
GATGACTGATAACAGCCTGGAGGAGAGGAGTTTGGAAATTATTGATATTCCTGATGATTTGGACGACGACTTTCTATCTCTCTATTTTGAGAACAAGCGACGCTCTGGAGGAGGGAACGTGGTCTCTTTGGAGAGACATGGAAACCAAGCGTTGGTAGTTTTTGAAGATGCAGAGACTGCTGCGAGAGTTGTCTCCAAGTCCCATGTCCTCCACAATATCACACTGACATTGCGAAGGAAACCACCAAAAGACCCTGGAAAACTGTTGCTGAGAGGGCTAAATCCACACACTTCCCTGGACCTTGTGGAGCTTTATGTGGAAAACATTATTGGAATGACCTTTGAAACAGACTTCATCTTGTACCCATCTCCAAACAAGGACCTGGTTCTAGTACACCTAAAGAAACCCTTGTCTAAAGATTTTCAGGTGCTTAGTGATGAAGTTTCCAAGAAGACTCTAAATGGAGCAAAGGTCACTCTGGAGCAGGTAGAATCTACAGACTCAGTTTTGGTGTCCAATCTGTCTCCTGCCCACACTGAGGATGTGCTGGAGCTCTATTTTGGGAGTAGTCGTGGTGGAGGGGCGGATGTTCTCGGAGTTAGCATGCTGGCTAAAGGATGTGCTAAAGTTTCTTTCAAGGATGTGAAATCTGTGGACTGCATTCTCCAAAAATCCCATAATTTGGAAGGTACAGATTTAGTAATCGAGCCGTACTTTGACTTCCTGCATGCTGTGGTGGATCAGTCGTCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000320_00235265_00237642.mRNA True 751 mRNA 0.45 4 235265 237642

Neighbor

gene id symbol gene type direction distance location
CI01000320_00229061_00235087 NA coding downstream 178 228750 ~ 235087 (-)
CI01000320_00207493_00228007 CPSF1 coding downstream 7173 207311 ~ 228092 (-)
CI01000320_00163150_00192941 CTDP1 coding downstream 42324 163021 ~ 192941 (-)
CI01000320_00122527_00132044 NA coding downstream 102845 121958 ~ 132420 (-)
CI01000320_00001038_00027798 KCNG2 coding downstream 207467 544 ~ 27798 (-)
CI01000320_00264815_00284889 RNF19A coding upstream 26877 264519 ~ 285217 (-)
CI01000320_00316109_00326335 PABPC1B, PABPC1, PABPC1A coding upstream 77990 315632 ~ 326834 (-)
CI01000320_00331521_00343779 YWHAZ coding upstream 93839 331481 ~ 343779 (-)
CI01000320_00346954_00349228 ZNF706.2.S, ZNF706.2.L, ZNF706, ZNF706.2 coding upstream 108589 346199 ~ 349445 (-)
CI01000320_00388838_00393457 NCALDA, NCALDB, HPCAL1, NCALD, HPCAL1.L, HPCA.S, NCALD.L, HPCA coding upstream 150865 388507 ~ 393457 (-)
G454394 NA non-coding downstream 188250 46780 ~ 47015 (-)
G454387 NA non-coding downstream 198666 36399 ~ 36599 (-)
G454414 NA non-coding upstream 73842 311484 ~ 311748 (-)
G454440 NA non-coding upstream 189581 427223 ~ 428081 (-)
G454442 NA non-coding upstream 194811 432453 ~ 432971 (-)
G454432 NA non-coding upstream 241427 479069 ~ 480597 (-)
G454445 NA non-coding upstream 243631 481273 ~ 481628 (-)
G454495 NA other upstream 289417 527059 ~ 528552 (-)
G454663 NA other upstream 813826 1051468 ~ 1055895 (-)
G454686 NA other upstream 903600 1141242 ~ 1141880 (-)
CI01000320_01338270_01341123 SH3BGRL3 other upstream 1098637 1336279 ~ 1343274 (-)

Expression


Co-expression Network