CI01000320_02201385_02204409



Basic Information


Item Value
gene id CI01000320_02201385_02204409
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information


Item Value
chromosome id CI01000320
NCBI id null
chromosome length 3894707
location 2201124 ~ 2205644 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence


>CI01000320_02201385_02204409.mRNA
AAAAACTGCTTTTTGACCATTTTCCATTTTGGTACAGCGTTCCCTAAATCTTTTTTGATTTGCATGATTGAAGCTATTTCATGTAATAAAAACTTATTTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATTTTTTTTTTTTTTCATGGTTAGAACATAATGCATACCATAAAGGGTTAAGTGCACTTTTTCATATTAGAATTTTTAGTATGAACACAAGCACATACTAGACATACAAGAAATGTTTTGATGTATTTATTTATTTATTTGGCAACCCAAAACTGTGTAACATTGCCAGAATTAACTCTGTTAATTAACTTTTTTGCTCACCAGCCACTGTGGCTAGTGGTTTTCCAAAGTTACTAGCCACTCAGCATTTTTACCGGCCACAATTTTGCTGTTGGGAAATTACATTTTATATGATTAAAGTTGACTTTGACATGCTAAAATTACTTGATTTTAAGTCATTTTACTTGATTAGCTAGATTTAAAACCCTTTCAAATTTTCAAATGCAGATTGACCACCCAAATCAGTATCTATATCAGCTGGTATGTACGGGTGGGCAAGGGGTGGGTAATATGACCATAATATGATAAATTTTATAATTGTATAAGTTATTTTTGTTAGGCTATATAAAAAGAACTAAGAAGCAAATTAGTAAATTACAAATACAATAGTAAATAGCCTAAACTCTTTTTTCAGATACAGTAGGTTTATTTGACATTTATTTAACATCTTCTGTTGTTTGATTAACATTAATGACAGGTATTTAATTGGGCTGCTGAATGCATGGATGTAATATACTGACACATATCCAGTTATTACCCACCTGTTTACGTCCACTTAAGCCATAACCGACTGTATTCACGCGAGATACTCCACACGATGGACATTTTGACATCTGTGTGTGCGTGTATTTGACTATTCAGGCGCGCGCGACAGAGAGAGAGAGAGCGCACGCAAGAGAGTATATATATAATATATATATTATATTTATAATCAGTTGGAAAAGCTCCATTCTGATCCTCACCCACTTTTTTTTAATGATATAAGTGATTGCCCTTTTTTCGTTCAAAACCTCTTAGTCTCAGTTAGTGACCTACCATTTTAAAATGTTTCACAACTTGTTCCAAAAACATTTTAATGATTTCCATCCTACAAGTCGCTGCACTATACCTTTATATGCTGTAAAGATACTGAGCTTTTGTTAAAATAATGAGGGCATTTCCAGTAAGCAACACAAAAACAGTAATAGCGAGTGGTGACATTGAGCCCAGAGTTTTCTCCTTTGGTGGAAAGAACAGGATTTTCAGACAGACCCACCTTTACTACGCTGGCGAGGACGGGCTGAATGTGATCTATGACAAGGACATCTAGGGGATGTGTGGGGCTATTGAGTAACTCAGGGTACATGTATTCTGTCTATAGTTATCTGCTGTGGTGTTATCATTGCTTTGGAGAGAGCTGGTACACATCTCGTATTTTTTTTAGTAATGTGCAGGGACTTTGGTTTTACATTATGGGTTTTCAAATATACTGTTGTTTCTGGAAAATTACTAGTAAATTTGACCGTTGCACAACTTCCCATGGATTAGCACACATTTTTAATTACACGTCTTGAGATCCTGCTTTAATAAA

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
CI01000320_02201385_02204409.mRNA True 1658 mRNA 0.33 3 2201124 2205644

Neighbor


gene id symbol gene type direction distance location
CI01000320_02165761_02186455 HIVEP3A coding downstream 14669 2165761 ~ 2186455 (-)
CI01000320_02151521_02154094 EDN2 coding downstream 46923 2151242 ~ 2154201 (-)
CI01000320_02054421_02068560 PHACTR4A coding downstream 132564 2054411 ~ 2068560 (-)
CI01000320_01996579_02046284 NA coding downstream 154840 1996358 ~ 2046284 (-)
CI01000320_01914015_01916289 NA coding downstream 284835 1913304 ~ 1916289 (-)
CI01000320_02224076_02235673 SERINC2L, SERINC3, SERINC2 coding upstream 17825 2223469 ~ 2235673 (-)
CI01000320_02408906_02419474 NA coding upstream 203234 2408878 ~ 2419527 (-)
CI01000320_02485531_02487216 NA coding upstream 279887 2485531 ~ 2487249 (-)
CI01000320_02487442_02488157 NA coding upstream 281695 2487339 ~ 2488157 (-)
CI01000320_02511560_02512282 CITED4A coding upstream 304823 2510467 ~ 2514880 (-)
G455714 NA non-coding downstream 70478 2130414 ~ 2130646 (-)
G455681 NA non-coding downstream 78449 2050488 ~ 2122675 (-)
G455676 NA non-coding downstream 220068 1980746 ~ 1981056 (-)
G455663 NA non-coding downstream 249830 1949857 ~ 1951294 (-)
G455661 NA non-coding downstream 254764 1946132 ~ 1946360 (-)
G455720 NA non-coding upstream 142 2205786 ~ 2262847 (-)
G455765 NA non-coding upstream 115874 2321518 ~ 2321728 (-)
G455773 NA non-coding upstream 123051 2328695 ~ 2329027 (-)
G455774 NA non-coding upstream 128769 2334413 ~ 2334671 (-)
G455814 NA non-coding upstream 166574 2372218 ~ 2372527 (-)
CI01000320_01426753_01430603 NA other downstream 770471 1426176 ~ 1430654 (-)
CI01000320_01338270_01341123 SH3BGRL3 other downstream 859908 1336279 ~ 1343274 (-)
G454686 NA other downstream 1059244 1141242 ~ 1141880 (-)
G454663 NA other downstream 1145229 1051468 ~ 1055895 (-)
G454495 NA other downstream 1672572 527059 ~ 528552 (-)
G456317 NA other upstream 1437593 3643237 ~ 3648040 (-)

Expression



Co-expression Network