CI01000320_03338747_03341584



Basic Information


Item Value
gene id CI01000320_03338747_03341584
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information


Item Value
chromosome id CI01000320
NCBI id null
chromosome length 3894707
location 3338681 ~ 3342213 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence


>CI01000320_03338747_03341584.mRNA
ATGTCAGACACTTACAGCCTGGCTAAATACCTTGCACGCAGTCACTTGGTAACTTCTGGACTGAACACTTTTGATGAGAAACCTATAAATTATTGGGCTTGGAGATCATCTTTTAAAAGTTTCATTGCAGACCTTGACCTCAAGCCAGAGGAAGAGATTGATTTGCTCATCAAATATCTCGGCAGAGAATCATCGGAACAAGTACAAAGAATAAAATCAGTTAATATTAGGCACCCATTTGCAGGTCTACAAATGGCTTGGGAGAGGCTAGAGGAAATGTATGGCTCATCAGAGGCAATTGAAAGAGCTCTGTTCTCCAAACTGGAAAGCTTCCCTAAAATTTCAGGTAAAGATCCATATAGGCTGCGTGATCTTGGAGACCTGCTTGTAGAGCTGGAGGCAGCCAAGCTGGATGGCTATCTTCCTGGGTTGTCCTACATTGACACTGCTCATGGAGAAAGGAGAGACAGATCAGATAAATACAGGCACGCTACTATAGCTGTTCATAAAACCCAAGTTCACATGTCTGAGACAAGAGATGCAACTGACAGGATAAAATCTGTTGATCCTTATCGATATTGTATCATTCATGACAAGCCTCATCCACTAAAAAGATGCAGAGGCTTCAGAGCGAAAAGTCTTGAAGATCGCAAACAGTTTCTTAAGGAACATTCAATTTGCTCCTCTGTAGATCATATGGCAAAAAACTGCAAAGCTGAAATCCATTGCACTGAATGTGATAGCGATCATCATGTTTCAGCTCTACATCCTGGTCCAGCACCCTGGAAGAAAACTATCCCTCCTGTCTTAGAAGATGGAGGGGAGGAAAGTGTGAATATTGATGGTGTATCATTGAGGATGGCTTCAGACAAAGAAGTTCATGAGGATAGTTTTCTTGGTGATAGTTAGAGCCACTATAGGAGTAATTGACTGTTTGTACTGTTTAAATTGATTATGGATATGTCACCTAATATA

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
CI01000320_03338747_03341584.mRNA False 975 mRNA 0.41 4 3338681 3341584

Neighbor


gene id symbol gene type direction distance location
CI01000320_03332546_03334590 NA coding downstream 3138 3332141 ~ 3335543 (-)
CI01000320_03302588_03304943 NA coding downstream 33738 3302423 ~ 3304943 (-)
CI01000320_03244987_03246052 NA coding downstream 92163 3243339 ~ 3246518 (-)
CI01000320_03049733_03050293 NA coding downstream 288317 3049468 ~ 3050364 (-)
CI01000320_02561459_02599705 NA coding downstream 738837 2561372 ~ 2599844 (-)
CI01000320_03456251_03458846 STMN1, STMN1A, STMN1B coding upstream 114547 3456131 ~ 3458846 (-)
CI01000320_03521826_03531909 FHL3, SF3A3.S, SF3A3 coding upstream 180016 3521600 ~ 3531909 (-)
CI01000320_03536880_03548445 NA coding upstream 194818 3535246 ~ 3548475 (-)
CI01000320_03564239_03566141 NA coding upstream 222190 3563774 ~ 3566985 (-)
CI01000320_03639518_03642111 NKIRAS1 coding upstream 297811 3639395 ~ 3642111 (-)
G456251 NA non-coding downstream 39449 3298999 ~ 3299232 (-)
G456249 NA non-coding downstream 44803 3293203 ~ 3293878 (-)
G456247 NA non-coding downstream 51055 3287378 ~ 3287626 (-)
G456243 NA non-coding downstream 74691 3263756 ~ 3263990 (-)
G456300 NA non-coding upstream 105601 3447185 ~ 3447438 (-)
G456117 NA non-coding upstream 125430 3467014 ~ 3486769 (-)
G456303 NA non-coding upstream 148790 3490374 ~ 3492128 (-)
G456311 NA non-coding upstream 168395 3509979 ~ 3511517 (-)
G456316 NA non-coding upstream 191456 3533040 ~ 3533260 (-)
CI01000320_01426753_01430603 NA other downstream 1908028 1426176 ~ 1430654 (-)
CI01000320_01338270_01341123 SH3BGRL3 other downstream 1997465 1336279 ~ 1343274 (-)
G454686 NA other downstream 2196801 1141242 ~ 1141880 (-)
G454663 NA other downstream 2282786 1051468 ~ 1055895 (-)
G454495 NA other downstream 2810129 527059 ~ 528552 (-)
G456317 NA other upstream 301653 3643237 ~ 3648040 (-)

Expression



Co-expression Network