G456303


Basic Information

Item Value
gene id G456303
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000320
NCBI id null
chromosome length 3894707
location 3490374 ~ 3492128 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU523810
GTTTGCTTGTATGTTGAGTGACCATTAACTGACATCAGAGAACCGTCAACATGCAAATGTGTTGTTAAATTATTAAAATAATAACTTGAAATCTGAGGGGACTATTTCAAGTAAATATTTAACATCTAAGGGGTCTCAGATGACAAAAATGTTTAGGAAGACCTACTCTAAGGTACTAATATGCACCTTTTAATGGGTAGATAAGGTACAAAGTTATCTGCTTAAGGGTACAAGCTGTTGCACCCCTAACAGTAATTTTTTTTTCGACAGTGTTTAAAAAATACATCAGAATAAAAAATCATAAACAAAGTGTTTGTGTAAGCAGATAAGTTTTATGGATCTCTCACCAGTTACCTTGATACTGTGTCTATGGGCAGCGTCCATTACAGCTGGCACTAGATCCTCTGAGGGTTTGCCATGTTCATCTGCCACACCAGGCGGGTACCAGGACAGGACCACCACACCTGCAGCAGCAGCTTCGATTTGCGACATGTGGGATTCAATGACATCTGGATCTCTGGAGCTGTAGGGTCCCAGTTCAGGGTAATAACTGGACGCAATGTCGTCTGGAGGATTGTGTCGTCCTTTCGGGTGACTGGCAGCTATTTTGGGGTCCCAGTGTGGTACCAGTACGTGGTCCCAGTGTATATAACTACTGTCCATCTGTGGCGAGCCATACCATAAATAATAGAAGATGTGAATGTCATAAAATATGCTGTGGTCAGGACCAGAGTTGGAGAACACTATCTTGGTGTCACTCCCCCCACCAGCATTTTGACCTGCTGATTCAACTACATAATTGGGTCTCTGGTCCATTCGCTCTCCCACCAAAGGCATCAACTCCATTCCTGGAGCAAGATCCGAGAAACCATCAGTGGGTTTCAGGGTTCGTAGGCCCATCATAGTACCAAAAATGAAAAGAGTAAACAATAAAAGAGCCACGCACGCTTTCCTGCGTAACCTGTTCATGGTCGCTGTCCGTGGTGCTAGAGAAGACAGTTCAGAAATTGGTTAATATGGTCGAGGCCTCCAAAAGTAGGTTGTAAAATGCTTGTGTTCCATCTCCAGTTCCAGTTTGCCCTATCTATCAAACTTGCGTTTGGCACTCCGGGTTGGTCGCTTGGTCCTCATCAAGAAGCCATTATCTTTGTTACATTAGCGATTTATAAAAACAAATAGCTAGGTAAAAAAATAGCTAAGATGTTTTAATTAATTTCTGAACATACGAGGATATTAAGCTGACAAACCAGCCTACATTATTTATTACGGCATATTTATAACCTAACAGCATTCGCTATATAACTGAATCAACAATTCACAACGCATTTTTTTTTCTTTTTGTTAAAGTCGCACACGCCCGTTTGAATTCGACGCAAAAGCTTCCATGCAATCATGTATTTATCACATACACCGTTGTGTTGCTTCCCACTCGCAAACTGCACGCTGTCTTCTCTCTGGTGTTCTCTCACGCGTGGATTTTTATTCTAATCCTTCTGCGCGGTATAAAACACTTTCACATCAGATGTACTGGCTTTGTGAAAGCATCGGCTGATTTCTGTGCGTCTGTCGCCACTGTGCTCATGATAAATC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU523810 True 1590 lncRNA 0.42 2 3490374 3492128

Neighbor

gene id symbol gene type direction distance location
CI01000320_03456251_03458846 STMN1, STMN1A, STMN1B coding downstream 31528 3456131 ~ 3458846 (-)
CI01000320_03338747_03341584 NA coding downstream 148790 3338681 ~ 3342213 (-)
CI01000320_03332546_03334590 NA coding downstream 154831 3332141 ~ 3335543 (-)
CI01000320_03302588_03304943 NA coding downstream 185431 3302423 ~ 3304943 (-)
CI01000320_03244987_03246052 NA coding downstream 243856 3243339 ~ 3246518 (-)
CI01000320_03521826_03531909 FHL3, SF3A3.S, SF3A3 coding upstream 29472 3521600 ~ 3531909 (-)
CI01000320_03536880_03548445 NA coding upstream 44274 3535246 ~ 3548475 (-)
CI01000320_03564239_03566141 NA coding upstream 71646 3563774 ~ 3566985 (-)
CI01000320_03639518_03642111 NKIRAS1 coding upstream 147267 3639395 ~ 3642111 (-)
CI01000320_03825336_03853470 NA coding upstream 332535 3824663 ~ 3853686 (-)
G456117 NA non-coding downstream 3605 3467014 ~ 3486769 (-)
G456300 NA non-coding downstream 42936 3447185 ~ 3447438 (-)
G456251 NA non-coding downstream 191142 3298999 ~ 3299232 (-)
G456249 NA non-coding downstream 196496 3293203 ~ 3293878 (-)
G456311 NA non-coding upstream 17851 3509979 ~ 3511517 (-)
G456316 NA non-coding upstream 40912 3533040 ~ 3533260 (-)
G456327 NA non-coding upstream 51935 3544063 ~ 3544966 (-)
G456332 NA non-coding upstream 91705 3583833 ~ 3584032 (-)
CI01000320_01426753_01430603 NA other downstream 2059721 1426176 ~ 1430654 (-)
CI01000320_01338270_01341123 SH3BGRL3 other downstream 2149158 1336279 ~ 1343274 (-)
G454686 NA other downstream 2348494 1141242 ~ 1141880 (-)
G454663 NA other downstream 2434479 1051468 ~ 1055895 (-)
G454495 NA other downstream 2961822 527059 ~ 528552 (-)
G456317 NA other upstream 151109 3643237 ~ 3648040 (-)

Expression


Co-expression Network