G456332



Basic Information


Item Value
gene id G456332
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information


Item Value
chromosome id CI01000320
NCBI id null
chromosome length 3894707
location 3583833 ~ 3584032 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence


>TU523849
AGTAGTCCATATCACCGCCGAGCTCGCTTTGCAAGTAGGAGCTCTTCACCATGAACAAATCCGCTTCTATGTTATTCACTCACCCAACAACCCAGTGATCCTTGGTCTACCATGGCTCAGAACCCATAACCCTCACGTTTCCTGGAAAGATGGCCAGATTGTGCAATGGGACGCTAACTGCCATAAAAGTTGCTTGAAAC

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU523849 True 200 lncRNA 0.48 1 3583833 3584032

Neighbor


gene id symbol gene type direction distance location
CI01000320_03564239_03566141 NA coding downstream 16848 3563774 ~ 3566985 (-)
CI01000320_03536880_03548445 NA coding downstream 35358 3535246 ~ 3548475 (-)
CI01000320_03521826_03531909 FHL3, SF3A3.S, SF3A3 coding downstream 51924 3521600 ~ 3531909 (-)
CI01000320_03456251_03458846 STMN1, STMN1A, STMN1B coding downstream 124987 3456131 ~ 3458846 (-)
CI01000320_03338747_03341584 NA coding downstream 242249 3338681 ~ 3342213 (-)
CI01000320_03639518_03642111 NKIRAS1 coding upstream 55363 3639395 ~ 3642111 (-)
CI01000320_03825336_03853470 NA coding upstream 240631 3824663 ~ 3853686 (-)
G456327 NA non-coding downstream 38867 3544063 ~ 3544966 (-)
G456316 NA non-coding downstream 50573 3533040 ~ 3533260 (-)
G456311 NA non-coding downstream 72316 3509979 ~ 3511517 (-)
G456303 NA non-coding downstream 91705 3490374 ~ 3492128 (-)
G456339 NA non-coding upstream 21560 3605592 ~ 3605984 (-)
G456340 NA non-coding upstream 22199 3606231 ~ 3606506 (-)
G456342 NA non-coding upstream 23676 3607708 ~ 3607926 (-)
G456343 NA non-coding upstream 24091 3608123 ~ 3608401 (-)
G456324 NA non-coding upstream 53489 3637521 ~ 3638707 (-)
CI01000320_01426753_01430603 NA other downstream 2153180 1426176 ~ 1430654 (-)
CI01000320_01338270_01341123 SH3BGRL3 other downstream 2242617 1336279 ~ 1343274 (-)
G454686 NA other downstream 2441953 1141242 ~ 1141880 (-)
G454663 NA other downstream 2527938 1051468 ~ 1055895 (-)
G454495 NA other downstream 3055281 527059 ~ 528552 (-)
G456317 NA other upstream 59205 3643237 ~ 3648040 (-)

Expression



Co-expression Network