RNA id: TU523849



Basic Information


Item Value
RNA id TU523849
length 200
lncRNA type inter_gene
GC content 0.48
exon number 1
gene id G456332
representative True

Chromosome Information


Item Value
chromosome id CI01000320
NCBI id null
chromosome length 3894707
location 3583833 ~ 3584032 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


AGTAGTCCATATCACCGCCGAGCTCGCTTTGCAAGTAGGAGCTCTTCACCATGAACAAATCCGCTTCTATGTTATTCACTCACCCAACAACCCAGTGATCCTTGGTCTACCATGGCTCAGAACCCATAACCCTCACGTTTCCTGGAAAGATGGCCAGATTGTGCAATGGGACGCTAACTGCCATAAAAGTTGCTTGAAAC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU523844 lncRNA downstream 38867 3544063 ~ 3544966 (-) True G456327
TU523841 lncRNA downstream 46058 3536128 ~ 3537775 (-) True CI01000320_03536880_03548445
TU523839 lncRNA downstream 46084 3535246 ~ 3537749 (-) False CI01000320_03536880_03548445
TU523824 lncRNA downstream 50573 3533040 ~ 3533260 (-) True G456316
TU523818 lncRNA downstream 72316 3509979 ~ 3511517 (-) True G456311
TU523856 lncRNA upstream 21560 3605592 ~ 3605984 (-) True G456339
TU523857 lncRNA upstream 22199 3606231 ~ 3606506 (-) True G456340
TU523859 lncRNA upstream 23676 3607708 ~ 3607926 (-) True G456342
TU523860 lncRNA upstream 24091 3608123 ~ 3608401 (-) True G456343
TU523837 lncRNA upstream 53489 3637521 ~ 3638707 (-) True G456324
CI01000320_03564239_03566141.mRNA mRNA downstream 16848 3563774 ~ 3566985 (-) True CI01000320_03564239_03566141
CI01000320_03536880_03548445.mRNA mRNA downstream 35358 3536402 ~ 3548475 (-) False CI01000320_03536880_03548445
CI01000320_03521826_03531909.mRNA mRNA downstream 51924 3521600 ~ 3531909 (-) True CI01000320_03521826_03531909
CI01000320_03456251_03458846.mRNA mRNA downstream 124987 3456131 ~ 3458846 (-) True CI01000320_03456251_03458846
CI01000320_03338747_03341584.mRNA mRNA downstream 242249 3338681 ~ 3341584 (-) False CI01000320_03338747_03341584
CI01000320_03639518_03642111.mRNA mRNA upstream 55363 3639395 ~ 3642111 (-) True CI01000320_03639518_03642111
CI01000320_03825336_03853470.mRNA mRNA upstream 240631 3824663 ~ 3853686 (-) True CI01000320_03825336_03853470
TU522089 other downstream 2153180 1426783 ~ 1430653 (-) False CI01000320_01426753_01430603
TU522090 other downstream 2153180 1426783 ~ 1430653 (-) False CI01000320_01426753_01430603
TU522091 other downstream 2153180 1426783 ~ 1430653 (-) True CI01000320_01426753_01430603
TU521994 other downstream 2242617 1336279 ~ 1341216 (-) True CI01000320_01338270_01341123
TU522025 other downstream 2441953 1141242 ~ 1141880 (-) True G454686
TU523828 other upstream 59205 3643237 ~ 3648040 (-) False G456317
TU523830 other upstream 59205 3643237 ~ 3648040 (-) True G456317

Expression Profile