CI01180000_04970618_04977149


Basic Information

Item Value
gene id CI01180000_04970618_04977149
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01180000
NCBI id null
chromosome length 11503085
location 4970220 ~ 4977149 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01180000_04970618_04977149.mRNA
TGGCAACATCGTATGTCAATCGATGTCTCATAAGGACAATCACGAGATGTCTCCGGGACAGTCGTCGGCAACCAAATGTTATGACAGCAAGGCCTTTAGGACACTTTTCTAACACCTCTTCAGGTAAGCAGGAACATGTAGAAGTACAAACTGTAGTTTCACACCGGGGTTCAGGAGGCAGCAGTCGCACCGCTCCCCTGGCAGTCGCTTTTGGACTGGGACTCGGAGGAGCAGCAGCCTTATTATATTCATTAAGAGACGAGAACAATAAAGATGCCCTACAGAGGACAGTCGCGGTCAGGAATTTGCTGATTGACAGCATACTACCTACTGTCCAGTGTGCCTCTCCATTTAAACCTGACAGTCCTCGGTACAAGTACAATTTCATCGCGGATGTGGTTGAGAAGTCTACTCCTGCTGTAGTCTACATCGAGATCGTTGGGCGGCACCCTTTTTCTGGCCGTGAGGTGCCCATCTCGAATGGCTCCGGCTTCATCATAAGTAGTGATGGCCTAATAGTGACCAATGCCCACGTGGTTGCCAACAAGCGTGGAGTCCGTGTCAAACTGACCAATGGAGAGACTTATAATGCCACTGTCCAGGATGTAGACCAGGCTGCAGACATCGCCACCATCAAAATCAATGCTAAGGATCCCCTCCCAACGCTGCGTCTTGGTCAGTCGTCTGATGTGCGTCAGGGTGAGTTCGTGGTTGCCATGGGGAGCCCCTTTTCTCTTAAAAACACAATCACATCTGGAATCATCAGCTCTGTCCAGAGAGGCAGTAGAGAACTGGGCCTGTCCAACTCCAACATGGACTACATCCAGACTGATGCTACCATAGACGATGGGGATGTCATCGGAATTAATACTATGAAAGTGACTGCAGGGATTTCCTTCGCTATTCCCTCAGACAGAGTCCGTCTCTTCCTTGAGCGTGCTGCAGACAAGCAGAGGTCCTGGTTTGGAGAATCGGGATCAAAACGGCGTTACATTGGAGTGATGATGTTGACTTTGACCCCCAGGATAATCGAAGAGCTGAAGATGCGTGACATGTCCTTTCCTGATGTTTCTCATGGAGTTCTTATCCACCGTGTTATTATAGGATCTCCAGCCAGTAGGGCCGGAATGAAACCAGGGGATGTTATTGTTGAGATAAACGGGGCAAAGGTGAACACGTCAGAAGAGATCTATAATGCTGTGAGGACAAGCGACAGCTTAAACATGGTGATCCGCCGGGGTGCCGACCTCCTCATGCTGCACATGACCCCAGAGTCCACGGAGTGACATCATGTGAAGCTTATGCATTAAAAAAAAAGAGAGAGTAAGAAATGGCTTTGCTGAGGATAGCTGGTGAGAAATGAGAAGCGAGAGATAATTTGAGAATCAATGTGAGGAAAAATAATTGTTGAAGATTTTTAATGATGTAAAGGTCTGAACAGTCTAGTTTGTTTAGCCAAGCTGGACATTTGTGTAGTTGAAATCTTTTAATTGTGCAGTTTGTGCACGTTTTTGGAAGTATATGAATTAGTGTGGATGATTCTGAGAATTGCACTGGATTAATATCAAGGTCCTCGCAAACTACACTGTATCAGTATTGTTTTTTTCAAGGAAATCCACTAATTATTCGTGTTTGGGAAACACGATTGTCAAAAGATCAGTGAACATTTGACCACCATAATAAAA

Function

GO:

id name namespace
GO:0005575 cellular_component cellular_component

KEGG:

id description
K08669 HTRA2, PRSS25; HtrA serine peptidase 2

RNA

RNA id representative length rna type GC content exon number start site end site
CI01180000_04970618_04977149.mRNA True 1685 mRNA 0.46 7 4970220 4977149

Neighbor

gene id symbol gene type direction distance location
CI01180000_04885766_04904637 RAB11FIP5A, RAB11FIP5 coding downstream 64838 4884939 ~ 4905382 (-)
CI01180000_04863395_04878213 NA coding downstream 92007 4863048 ~ 4878213 (-)
CI01180000_04833972_04834223 NA coding downstream 133379 4833004 ~ 4836841 (-)
CI01180000_04796238_04797552 NA coding downstream 172388 4796176 ~ 4797842 (-)
CI01180000_04790491_04793557 NA coding downstream 176556 4789538 ~ 4793664 (-)
CI01180000_04978607_04980946 NA coding upstream 1419 4978568 ~ 4980946 (-)
CI01180000_04982861_04987087 NA coding upstream 5579 4982728 ~ 4987087 (-)
CI01180000_04990672_04994457 NA coding upstream 13523 4990672 ~ 4994457 (-)
CI01180000_04998493_05007180 NA coding upstream 20662 4997811 ~ 5007180 (-)
CI01180000_05041556_05041966 GRXCR1 coding upstream 64407 5041556 ~ 5042081 (-)
G683183 NA non-coding downstream 4720 4965040 ~ 4965500 (-)
G683182 NA non-coding downstream 9295 4959202 ~ 4960925 (-)
G683184 NA non-coding downstream 112046 4856183 ~ 4858174 (-)
G683203 NA non-coding downstream 128532 4841475 ~ 4841688 (-)
G683140 NA non-coding downstream 226420 4743483 ~ 4743800 (-)
G683162 NA non-coding upstream 79123 5056272 ~ 5058160 (-)
G683267 NA non-coding upstream 164366 5141515 ~ 5141810 (-)
G683268 NA non-coding upstream 164966 5142115 ~ 5142388 (-)
G683275 NA non-coding upstream 192733 5169882 ~ 5201656 (-)
G683339 NA non-coding upstream 225167 5202316 ~ 5202642 (-)
CI01180000_03242704_03242928 YPEL5 other downstream 1725263 3241341 ~ 3242929 (-)
CI01180000_03016426_03018342 NA other downstream 1950545 3014433 ~ 3018343 (-)
CI01180000_02988807_02995955 NA other downstream 1976356 2987081 ~ 2997401 (-)
G680506 NA other downstream 2118304 2771047 ~ 2851916 (-)
G683394 NA other upstream 641058 5618207 ~ 5619271 (-)
G683294 NA other upstream 773895 5751044 ~ 5755526 (-)
G683673 NA other upstream 1784926 6762075 ~ 6762844 (-)
G684018 NA other upstream 2425998 7403147 ~ 7413132 (-)
G684071 NA other upstream 2529741 7506890 ~ 7525654 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location