Gene
RNA
| Item | Value |
|---|---|
| gene id | G683339 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01180000 |
| NCBI id | null |
| chromosome length | 11503085 |
| location | 5202316 ~ 5202642 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU804567 | True | 327 | lncRNA | 0.39 | 1 | 5202316 | 5202642 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01180000_05058846_05074279 | CPXM1A | coding | downstream | 128037 | 5058846 ~ 5074279 (-) |
| CI01180000_05041556_05041966 | GRXCR1 | coding | downstream | 160235 | 5041556 ~ 5042081 (-) |
| CI01180000_04998493_05007180 | NA | coding | downstream | 195136 | 4997811 ~ 5007180 (-) |
| CI01180000_04990672_04994457 | NA | coding | downstream | 207859 | 4990672 ~ 4994457 (-) |
| CI01180000_04982861_04987087 | NA | coding | downstream | 215229 | 4982728 ~ 4987087 (-) |
| CI01180000_05249220_05271562 | PDZD7, PDZD7A | coding | upstream | 44568 | 5246669 ~ 5271562 (-) |
| CI01180000_05287164_05287414 | NA | coding | upstream | 84069 | 5286700 ~ 5287523 (-) |
| CI01180000_05290530_05291418 | FAM213AA | coding | upstream | 87856 | 5290498 ~ 5293458 (-) |
| CI01180000_05294164_05297149 | NA | coding | upstream | 91368 | 5294010 ~ 5297149 (-) |
| CI01180000_05320485_05336119 | NA | coding | upstream | 117433 | 5320075 ~ 5336119 (-) |
| G683275 | NA | non-coding | downstream | 660 | 5169882 ~ 5201656 (-) |
| G683268 | NA | non-coding | downstream | 59928 | 5142115 ~ 5142388 (-) |
| G683267 | NA | non-coding | downstream | 60506 | 5141515 ~ 5141810 (-) |
| G683162 | NA | non-coding | downstream | 144156 | 5056272 ~ 5058160 (-) |
| G683180 | NA | non-coding | downstream | 155503 | 4967441 ~ 5046813 (-) |
| G683341 | NA | non-coding | upstream | 2308 | 5204950 ~ 5205250 (-) |
| G683303 | NA | non-coding | upstream | 80417 | 5283059 ~ 5286127 (-) |
| G683295 | NA | non-coding | upstream | 84058 | 5287953 ~ 5288093 (-) |
| G683380 | NA | non-coding | upstream | 289525 | 5492167 ~ 5492379 (-) |
| CI01180000_04796238_04797552 | NA | other | downstream | 404474 | 4796176 ~ 4797842 (-) |
| CI01180000_03242704_03242928 | YPEL5 | other | downstream | 1957359 | 3241341 ~ 3242929 (-) |
| CI01180000_03016426_03018342 | NA | other | downstream | 2182641 | 3014433 ~ 3018343 (-) |
| CI01180000_02988807_02995955 | NA | other | downstream | 2208452 | 2987081 ~ 2997401 (-) |
| G680506 | NA | other | downstream | 2350400 | 2771047 ~ 2851916 (-) |
| G683394 | NA | other | upstream | 415565 | 5618207 ~ 5619271 (-) |
| G683294 | NA | other | upstream | 548402 | 5751044 ~ 5755526 (-) |
| G683673 | NA | other | upstream | 1559433 | 6762075 ~ 6762844 (-) |
| G684018 | NA | other | upstream | 2200505 | 7403147 ~ 7413132 (-) |
| G684071 | NA | other | upstream | 2304248 | 7506890 ~ 7525654 (-) |
