CI01180000_05058846_05074279 (CPXM1A)


Basic Information

Item Value
gene id CI01180000_05058846_05074279
gene name CPXM1A
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01180000
NCBI id null
chromosome length 11503085
location 5058846 ~ 5074279 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01180000_05058846_05074279.mRNA
GAAGGAAAATGTTAATGCAAAAAGTACATATTTGTGGTGCAATAATACTTTGCATTACACACCACTGTCTTTCATCTGAAAATCAGATTGTCAGTAATAATGTTACTAAATCTGAATCCAACGATTTAAAGTCAATATTTAATCTGGATGGAAATGTTACTAAAAGTTTGGACAAAGCAAACCCCGCTGAAGACCACACTCAAGCGCTGAGGAATACCAGTGAAGATGGAGAACAGATGAACAAAGAGACCCATGGAGGTTACATTTGTTTGTCTCAATCTCTATCAGATTGTCCACCGCTGGGTTTGGAGTCTCTGAAAGTCTCTGATGATCAGTTGGAGTCTTCCTCGTATTTGAGCGTAGGGCTCGGTCCTCACAGAGGACGCCTTAACATACAGGCTGGTCTGGAGGATGATGATGAGTATGACGGAGCGTGGTGTGCTGGGGTGGAGGATCAGGAACAGTGGTTGCAGTTGGATGCTCTCAGACCGACACTCTTTACTGGCGTCATCCTCCAGGGCAGAAACTCTATCTGGAGGTTGAACTGGGTCCGCACGTATAAGGTGCAGTTCAGTAATGACTCATTGGTCTGGCAGCCCTGCATGAATGGATCAGAGGAGGCCGTTTTTGTCGGGAATGAAGATTTGGAGACGCCAGTTTTGGCTCTGTTTCCTGAGCCCTCAGTGGCCCAGTACATTCGCATTAACCCACAGACCTGGTTTAGCAATGGCACCATTTGCCTCCGGGCTGAAGTGCTGGGTTGCCCAATGCCAGGTCCTGACAGCCCGCAATTTGCTGAAACTGAGAGCGGATCTACAGATGACCTCGACTTCAGACACCATAATTATAATGAGATGAGGAAGGTAATGAAGTCTGTGAATGACGAGTGTCCGAATATCACACGGATCTACACTATTGGGAGGAGCTACACTGGACTGAAGCTTTATGTCATGGAAATATCAGATAACCCAGGAAAACATGAGCTTGGTGAGCCAGAGTTTCGCTATGTTGCCGGGATGCATGGGAATGAAGTTTTGGGCCGGGAGCTCTTGCTAAATCTTATGCAGTACATCTGCCGTGAATACAACCGAGGCAATCAGCGTGTCATACAGCTGGTAAAGGACACACGCATCCATCTGTTGCCATCTATGAACCCAGACGGATATGAAACAGCCTATGAGAAGGGCTCAGAACTCTCTGGCTGGGCTCTTGGACGCTACAGCTTTGAGGGCATTGACATGAACCATAACTTCCCTGACCTCAACAACATCATGTGGGACACTCAGGAGTTGGCCATGGACAAGAGGAGAGTGAGCAACCACTACATTCCCATGCCAGAGTACTACACCTCAACCGAAGCATTAGTTGCCCCGGAGACGCGTGCTGTAATCAGCTGGATGCAAGATATACCGTTTGTACTGAGTGCTAATCTGCACGGGGGAGAGCTGGTGGTCACTTACCCTTTCGACTGCACACGTGACTGGATCCCTCGCCAGGACACACCCACTGCAGACAATGATTTCTTCCGTTGGTTGGCTACCATCTATGCCTCAGCCAATCTGGTGATGGCAAACCCAGATCGGAGGATCTGTCACTCAGAAGACTTCCAGCAGCACAACAACATCATCAATGGAGCCGACTGGCACACTGTTCCAGGGAGCATGAATGACTTCAGTTATCTCCACACAAATTGTTTCGAAATAACTGTAGAACTGTCCTGTGATAAATTCCCACATGCCAGTGAGCTTCCTGTCGAGTGGGAGAACAACAAAGAGTCTCTCCTGCTGTACATGGAGCAGGTGCACAGAGGTATAAAGGGCGTTATCAGGGATAAGGACACTAAAGCTGGCATTGCAAATGCCGTCATTAAGGTGGACGGCCTGGATCATGACATAAGATCTGGTCTAGGTGGTGATTACTGGCGTTTACTGAACCCAGGTGAGTACAAGATAACGGTGTGGGCAGAAGGCTATTTCCCCCGCATCCGCCACTGCTCTGTAGGGTCAGAGCCCCACGCAACCATCTGTGACTTCACCCTCACCAAGACATCACAGGATCGCCTAAAACAGATCCTGGCAAGTGGTAGAAAAATTCCCCGGGATGACCAGGTACGGATCCGAGCCATGCGAATGCGCAAACTCCGCATCAGCACCAAGATTCTGAACCGCCGTCGAGAACAACAGCAGCGCCTTAACAAAGTTAAACGGAAGT

Function

symbol description
cpxm1a Predicted to enable metallocarboxypeptidase activity. Predicted to be involved in peptide metabolic process and protein processing. Predicted to act upstream of or within proteolysis. Predicted to be active in extracellular space. Orthologous to human CPXM1 (carboxypeptidase X, M14 family member 1).

GO:

id name namespace
GO:0005615 extracellular space cellular_component

KEGG:

id description
K08638 CPXM1; carboxypeptidase X1

RNA

RNA id representative length rna type GC content exon number start site end site
CI01180000_05058846_05074279.mRNA True 2211 mRNA 0.49 13 5058846 5074279

Neighbor

gene id symbol gene type direction distance location
CI01180000_05041556_05041966 GRXCR1 coding downstream 16765 5041556 ~ 5042081 (-)
CI01180000_04998493_05007180 NA coding downstream 51666 4997811 ~ 5007180 (-)
CI01180000_04990672_04994457 NA coding downstream 64389 4990672 ~ 4994457 (-)
CI01180000_04982861_04987087 NA coding downstream 71759 4982728 ~ 4987087 (-)
CI01180000_04978607_04980946 NA coding downstream 77900 4978568 ~ 4980946 (-)
CI01180000_05249220_05271562 PDZD7, PDZD7A coding upstream 172931 5246669 ~ 5271562 (-)
CI01180000_05287164_05287414 NA coding upstream 212432 5286700 ~ 5287523 (-)
CI01180000_05290530_05291418 FAM213AA coding upstream 216219 5290498 ~ 5293458 (-)
CI01180000_05294164_05297149 NA coding upstream 219731 5294010 ~ 5297149 (-)
CI01180000_05320485_05336119 NA coding upstream 245796 5320075 ~ 5336119 (-)
G683162 NA non-coding downstream 686 5056272 ~ 5058160 (-)
G683180 NA non-coding downstream 12033 4967441 ~ 5046813 (-)
G683183 NA non-coding downstream 93346 4965040 ~ 4965500 (-)
G683182 NA non-coding downstream 97921 4959202 ~ 4960925 (-)
G683184 NA non-coding downstream 200672 4856183 ~ 4858174 (-)
G683267 NA non-coding upstream 67236 5141515 ~ 5141810 (-)
G683268 NA non-coding upstream 67836 5142115 ~ 5142388 (-)
G683275 NA non-coding upstream 95603 5169882 ~ 5201656 (-)
G683339 NA non-coding upstream 128037 5202316 ~ 5202642 (-)
G683341 NA non-coding upstream 130671 5204950 ~ 5205250 (-)
CI01180000_04796238_04797552 NA other downstream 261004 4796176 ~ 4797842 (-)
CI01180000_03242704_03242928 YPEL5 other downstream 1813889 3241341 ~ 3242929 (-)
CI01180000_03016426_03018342 NA other downstream 2039171 3014433 ~ 3018343 (-)
CI01180000_02988807_02995955 NA other downstream 2064982 2987081 ~ 2997401 (-)
G680506 NA other downstream 2206930 2771047 ~ 2851916 (-)
G683394 NA other upstream 543928 5618207 ~ 5619271 (-)
G683294 NA other upstream 676765 5751044 ~ 5755526 (-)
G683673 NA other upstream 1687796 6762075 ~ 6762844 (-)
G684018 NA other upstream 2328868 7403147 ~ 7413132 (-)
G684071 NA other upstream 2432611 7506890 ~ 7525654 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location