CI01180000_08863723_08881179


Basic Information

Item Value
gene id CI01180000_08863723_08881179
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01180000
NCBI id null
chromosome length 11503085
location 8863288 ~ 8882290 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01180000_08863723_08881179.mRNA
GTTGCGTTTGAATTTCATTAGTTTGGCATGGGAATGCGCTCCTAAATCACGCTCTTAACACAAAGTGTGCTCATTCTTTTGTCCTATAAAATCCAGGCATTATATTTCAGAACATATATATATATATATATAATCAACTAAATATTATTATTAAAATATTATAAAATATATTTTAAATATTTTAAAATGTATAATATTTTTGTCTGGGAGTGTTTGTAGCACACATACAAAAACACATGTAATTTTTCAGTAAAGTAACAAAAAACCCACAAACACATGTGTGCTGTTACACCCTTTTTGTTTTTAATGCTTTTTCTGCATACGACCTGAACAGGAAAAGCAAAGAGGGCGTAACAAACACAGACATAGAAAACACAAAGCGGTGGGTGACTGCCTCTGGCTCGTGTATTGTCTGATGGATATGGGCACTATTGAAGGGTCTTTATCTCACCTGCTCCAACTTGCCCTAGAGAAAGAATCAAGGATAAGAGACAATAATAAAAGAGACTCTTTATTCCCTCGGGACCATTCAAATTGTTTCTACCATTTCCACATGATGAGAACTGTTTGAGAAAAATGCTGTACAACTTATTACAGGGACATGCTCAAGGCCACAATAATGATGGCTTATGGCTTAACTACTACACATGAATATGTTTTAATTTAATTTCTTAATGTTAATTTTAATATGGTTGAATAGTAATAAAAATATTAACTAATTTAATTAAAACATTTGAATGTAGCTTTCAAGTATTTCTCATTTAGGTAAATGCTGATTCAATTCAAAACGTTGTTATTAATCATTTCTTCTTTATTTTCATGCATATATTTGAAAGTAGTTGTATCAGTAAGACAGAACCTAGTACCAAAAAATGTACTGTAAAAATTATTTAAGTACTGACTTGCTCCCAGAGTACATTTGATATCCTTAATATTAATATTTGGAGGGCAAAAAAAATCAGCAAATCTCAGAAAAAGAGTGTTGTGTGCAGTTTTAGGTTGAATAGAGGCTCTGTTCAGGATTTTAGTTTTCCTCCCAACACACTTCACTGGCACAAACCCACTTCCTGTCATGGGTTGATGGGATTGGTCACACACTGCTCTGACATCATGACAACTTTCAGATGGACAGAGAGTGAATGTGTGAGTGGTTCGAAAAAGAAGACAGGTGCAGTGATCTTAGCAGATGTAGAAACGTCTCCAGCATTCGTTACTACGGAAACACACTTTCATTTGAGGCCTCGGTTTCCACACCTGACGTACGCACAAACTCACTTCCACCAACTGTCAACTACAGCGGTGGAGAATAAAACAGGTCACCGTGTGAAGCCGGACGAACATAAGCAGTTCTCCGATCGCCTGAGTGACATCGAGCGTTTCCAGAGGGCCAGTCTGAGGATGAACCCTGGCAACGGGACCGCCCGCCCCCACCAATCCCATTACAGCCCCTCCGGCACCACACAGATACCAGGATTATGGCCAGATCAGATTGATCCTCCTGCACTGAAGACGTGCAAAGTGGAAGATGACTTACGCTGGTCAGGCGCCTGCATGCCAAAGCCTGCTCCAGTATCCCAGCAGCCCTTGCTCGATGCAATAAACAGAAAAATAAAGCCAGAAAACAACAAACTGGCAGAAACAGGCAGCAGTTTGTGTTTGTGTGCAGGTACAGAGCTGTTCCAGCAGAGGACATCTTTCCCGTCTCTGTCTCCATTAACGGCTCCTCGTTTCTCTGATTCACACATGCATTATCCGGGTCCTTTCACCTACTCTGCTAACCCGTCCAGCACTGGAATCGGTGGTCTCAGCGTGGCCGGTATGCCCACCTCCAGCCGCTACCACACCTACCTGCCGCCTCCCTATCCTGGCAACCAGAACCAGAACTCCCACTTCCAGACCAACTCCTCGCCGTACCACCTGTACTACGGCACCGGATCCGGCTCCTACCAGTTCTCCATGGTTCCGACCGGCGGCACCGGATCGGGAGGCGACAGGTCGCCCACCCGCATGCTGACGTCCTGTACCGCGGCGGGTGGAGCCGGTGGCACCGCTGGCGGAAACAACAGCCTGCTCAACGCCAGCCTCGGTAACCAGAGCGACGGGGTGGATGCCGACGGTAGCCATAGCAACTCGCCCACAGCGATGAGTGCGTCGACACGCATAGACGAGTCCGTCTGGAGGCCTTACTGAAAAATAGTGTGCGGAAAGACTGACAGAAGAGGTCAAAATTAAGAGAAAAGGTGAAAGTCATGCATGTTTGATCGTTTTATGTTTCTTTGTCCTTCTATGACGTCAATCGCTTCTAAGACAACCAAAGTGATCAAATGACCAGAAATTAGTTGCCTGACTGTTGACCTTTTGCTCTGGACGCTCTATATGGCACAGAAACGGACCTCCATTGATCAAAACTGAAGGACACAAGTCTCACAGGAAATTGATGTGTATATAGAAAGAGTAAAAAATTATCATTAAAAAATAAGGAAAGGTTCCCATAGTAATATATCAGCGACTTTTTTGTTACTGAAAAGGTGAACAAACCAAAGAAAAGAAAAGCAGGTGCTTCATGGACATATTGTGATGGGCCTGTAACTGAAAACAGACAATTTATCCAGCCTTACAAATAAAT

Function

NR:

description
runt-related transcription factor 3

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01180000_08863723_08881179.mRNA True 2626 mRNA 0.43 5 8863288 8882290

Neighbor

gene id symbol gene type direction distance location
CI01180000_08829933_08835423 CHP1, CHP2 coding downstream 27865 8829695 ~ 8835423 (-)
CI01180000_08817640_08823945 KHDRBS1A, KHDRBS1 coding downstream 39041 8817406 ~ 8824247 (-)
CI01180000_08794119_08796998 NA coding downstream 66290 8794119 ~ 8796998 (-)
CI01180000_08754638_08761116 NA coding downstream 102172 8754638 ~ 8761116 (-)
CI01180000_08745988_08748949 GLO1 coding downstream 113912 8745921 ~ 8749376 (-)
CI01180000_08884283_08892303 NA coding upstream 1556 8883846 ~ 8892677 (-)
CI01180000_08908610_08974338 NA coding upstream 26141 8908431 ~ 8974370 (-)
CI01180000_09031248_09034339 NA coding upstream 148735 9031025 ~ 9034339 (-)
CI01180000_09046542_09058939 NA coding upstream 164045 9046335 ~ 9058939 (-)
CI01180000_09106473_09108762 DESI2, DESI2.L coding upstream 223458 9105748 ~ 9108762 (-)
G684494 NA non-coding downstream 133812 8729274 ~ 8729476 (-)
G684488 NA non-coding downstream 185655 8677182 ~ 8677633 (-)
G684409 NA non-coding downstream 260845 8585305 ~ 8602443 (-)
G684405 NA non-coding downstream 392276 8470509 ~ 8471012 (-)
G684467 NA non-coding downstream 398611 8464418 ~ 8464677 (-)
G684509 NA non-coding upstream 44889 8927179 ~ 8927428 (-)
G684514 NA non-coding upstream 70929 8953219 ~ 8953428 (-)
G684553 NA non-coding upstream 143783 9026073 ~ 9026294 (-)
G684554 NA non-coding upstream 156790 9039080 ~ 9039312 (-)
G684555 NA non-coding upstream 157070 9039360 ~ 9039705 (-)
G684493 NA other downstream 139421 8722693 ~ 8723867 (-)
G684182 NA other downstream 952080 7910761 ~ 7911208 (-)
G684080 NA other downstream 1280485 7579404 ~ 7582803 (-)
G684071 NA other downstream 1337634 7506890 ~ 7525654 (-)
G684018 NA other downstream 1450156 7403147 ~ 7413132 (-)
G684929 NA other upstream 1016134 9895316 ~ 9901388 (-)
G686052 NA other upstream 2459326 11341616 ~ 11343496 (-)

Expression


Co-expression Network