G678717


Basic Information

Item Value
gene id G678717
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01180000
NCBI id null
chromosome length 11503085
location 783915 ~ 784202 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU799376
AAAAGAAAAAAAAAATGGCTAATTAGCATGTTGTTACATTTCTATAGTGAAATTTATAGAAAAAGTTCCTAGCGAAAAGAAAAAAATTGCTGATTAGCGTATTGTTACATTTCTATAATGGAATTTGTAGAAAAAATGACTAGCGAAAAGAAAAAAAATGGCTAATTAGCATGTTGTTACATTTCTATAGTGAAATTTATAGAAAAAGTTCCTAGCGAAAAGAACAAAATTACTGATTAGCATACTGTTACATTTCTATAGTGAAAATTTTAGAACAATTTACTAGCG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU799376 True 288 lncRNA 0.26 1 783915 784202

Neighbor

gene id symbol gene type direction distance location
CI01180000_00765917_00776252 NA coding upstream 7004 765797 ~ 776911 (+)
CI01180000_00737754_00743866 NA coding upstream 39704 735310 ~ 744211 (+)
CI01180000_00661446_00671602 MSH6 coding upstream 111727 661109 ~ 672188 (+)
CI01180000_00427700_00437883 NA coding upstream 345449 427650 ~ 438466 (+)
CI01180000_00368639_00375465 ZC3H6 coding upstream 407668 368639 ~ 376247 (+)
CI01180000_00812535_00858607 NA coding downstream 27655 811857 ~ 859005 (+)
CI01180000_00862066_00867985 NA coding downstream 76544 860746 ~ 868112 (+)
CI01180000_00947514_00949868 NA coding downstream 162219 946421 ~ 950906 (+)
CI01180000_00955725_01050852 SIPA1L2 coding downstream 170720 954922 ~ 1051826 (+)
CI01180000_01196818_01224406 EGLN1B, EGLN1, EGLN1A coding downstream 412584 1196786 ~ 1224915 (+)
G678629 NA non-coding upstream 3325 779794 ~ 780590 (+)
G678633 NA non-coding upstream 4296 777607 ~ 779619 (+)
G678640 NA non-coding upstream 6911 747265 ~ 777004 (+)
G678712 NA non-coding upstream 61458 722123 ~ 722457 (+)
G678654 NA non-coding upstream 69069 714434 ~ 714846 (+)
G678720 NA non-coding downstream 2159 786361 ~ 786662 (+)
G678653 NA non-coding downstream 14487 798689 ~ 798938 (+)
G678660 NA non-coding downstream 18749 802951 ~ 803490 (+)
G678736 NA non-coding downstream 93150 877352 ~ 877598 (+)
G678638 NA non-coding downstream 95814 880016 ~ 883028 (+)
G678440 NA other upstream 632263 147934 ~ 151652 (+)
G678751 NA other downstream 275641 1059843 ~ 1066091 (+)
G678637 NA other downstream 365349 1149551 ~ 1155672 (+)
G678946 NA other downstream 734151 1518353 ~ 1612547 (+)
G679076 NA other downstream 1010968 1795170 ~ 1799433 (+)
G679324 NA other downstream 1604665 2388867 ~ 2397360 (+)

Expression


Co-expression Network