Gene
RNA
| Item | Value |
|---|---|
| gene id | G679218 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01180000 |
| NCBI id | null |
| chromosome length | 11503085 |
| location | 2210789 ~ 2214934 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU799915 | True | 1457 | lncRNA | 0.45 | 5 | 2210789 | 2214934 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01180000_02158036_02158965 | HS3ST1L1 | coding | upstream | 51567 | 2157350 ~ 2159222 (+) |
| CI01180000_01942458_01949580 | NA | coding | upstream | 260142 | 1942127 ~ 1950647 (+) |
| CI01180000_01915282_01926129 | NA | coding | upstream | 284520 | 1914892 ~ 1926269 (+) |
| CI01180000_01865632_01870994 | NA | coding | upstream | 339700 | 1865509 ~ 1871089 (+) |
| CI01180000_01832263_01834405 | COX5B.2, COX5B2, COX5B | coding | upstream | 375790 | 1832013 ~ 1834999 (+) |
| CI01180000_02322594_02323609 | NA | coding | downstream | 105418 | 2320352 ~ 2323752 (+) |
| CI01180000_02362001_02362428 | NA | coding | downstream | 147026 | 2361960 ~ 2363530 (+) |
| CI01180000_02541296_02567509 | CFAP46 | coding | downstream | 326362 | 2541296 ~ 2567783 (+) |
| CI01180000_02574027_02588521 | NA | coding | downstream | 359093 | 2574027 ~ 2588824 (+) |
| CI01180000_02613130_02639905 | NA | coding | downstream | 397344 | 2612278 ~ 2639922 (+) |
| G679228 | NA | non-coding | upstream | 9354 | 2197189 ~ 2201435 (+) |
| G679050 | NA | non-coding | upstream | 82802 | 2121269 ~ 2127987 (+) |
| G679204 | NA | non-coding | upstream | 104696 | 2099698 ~ 2106093 (+) |
| G679202 | NA | non-coding | upstream | 111981 | 2098541 ~ 2098808 (+) |
| G679165 | NA | non-coding | upstream | 149778 | 2051527 ~ 2061011 (+) |
| G679047 | NA | non-coding | downstream | 23556 | 2238490 ~ 2241873 (+) |
| G679346 | NA | non-coding | downstream | 227341 | 2442275 ~ 2442571 (+) |
| G680148 | NA | non-coding | downstream | 357478 | 2572412 ~ 2572739 (+) |
| G680180 | NA | non-coding | downstream | 420841 | 2635775 ~ 2664245 (+) |
| G680204 | NA | non-coding | downstream | 468300 | 2683234 ~ 2683580 (+) |
| G679076 | NA | other | upstream | 411356 | 1795170 ~ 1799433 (+) |
| G678946 | NA | other | upstream | 654638 | 1518353 ~ 1612547 (+) |
| G678637 | NA | other | upstream | 1055117 | 1149551 ~ 1155672 (+) |
| G678751 | NA | other | upstream | 1144698 | 1059843 ~ 1066091 (+) |
| G678440 | NA | other | upstream | 2059137 | 147934 ~ 151652 (+) |
| G679324 | NA | other | downstream | 173933 | 2388867 ~ 2397360 (+) |
| CI01180000_02690045_02691641 | NKX6-2, NKX6-2.L, NKX6.2 | other | downstream | 474828 | 2689271 ~ 2693221 (+) |
| CI01180000_03571292_03571611 | GNG2.L, GBG2, GNG2 | other | downstream | 1338343 | 3569165 ~ 3573135 (+) |
| G680736 | NA | other | downstream | 1550757 | 3765691 ~ 3784441 (+) |
| G681137 | NA | other | downstream | 2568371 | 4783305 ~ 4785631 (+) |
