Gene
RNA
| Item | Value |
|---|---|
| gene id | G682981 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01180000 |
| NCBI id | null |
| chromosome length | 11503085 |
| location | 4390062 ~ 4390342 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU804171 | True | 281 | lncRNA | 0.39 | 1 | 4390062 | 4390342 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01180000_04327538_04335433 | NA | coding | downstream | 53673 | 4327360 ~ 4336389 (-) |
| CI01180000_04131891_04133055 | NA | coding | downstream | 256926 | 4130958 ~ 4133136 (-) |
| CI01180000_04082957_04114030 | FGFR3 | coding | downstream | 276032 | 4082648 ~ 4114030 (-) |
| CI01180000_03983803_04002213 | WHSC1 | coding | downstream | 387407 | 3983486 ~ 4002655 (-) |
| CI01180000_03824786_03831186 | ADH8A | coding | downstream | 558876 | 3824669 ~ 3831186 (-) |
| CI01180000_04554549_04560819 | NA | coding | upstream | 163099 | 4553441 ~ 4561772 (-) |
| CI01180000_04567468_04575805 | GFRA4, GFRA4A | coding | upstream | 176893 | 4567235 ~ 4575805 (-) |
| CI01180000_04780398_04786371 | AP5S1 | coding | upstream | 389556 | 4779898 ~ 4786371 (-) |
| CI01180000_04790491_04793557 | NA | coding | upstream | 399196 | 4789538 ~ 4793664 (-) |
| CI01180000_04796238_04797552 | NA | coding | upstream | 405834 | 4796176 ~ 4797842 (-) |
| G682980 | NA | non-coding | downstream | 687 | 4389128 ~ 4389375 (-) |
| G682979 | NA | non-coding | downstream | 1840 | 4387953 ~ 4388222 (-) |
| G682977 | NA | non-coding | downstream | 3208 | 4386154 ~ 4386854 (-) |
| G682925 | NA | non-coding | downstream | 4910 | 4384519 ~ 4385152 (-) |
| G682976 | NA | non-coding | downstream | 6616 | 4383124 ~ 4383446 (-) |
| G682982 | NA | non-coding | upstream | 2084 | 4392426 ~ 4392705 (-) |
| G682988 | NA | non-coding | upstream | 19921 | 4410263 ~ 4410482 (-) |
| G682987 | NA | non-coding | upstream | 23302 | 4413644 ~ 4416875 (-) |
| G682986 | NA | non-coding | upstream | 27666 | 4418008 ~ 4420032 (-) |
| G682989 | NA | non-coding | upstream | 37789 | 4428131 ~ 4429475 (-) |
| CI01180000_03242704_03242928 | YPEL5 | other | downstream | 1145105 | 3241341 ~ 3242929 (-) |
| CI01180000_03016426_03018342 | NA | other | downstream | 1370387 | 3014433 ~ 3018343 (-) |
| CI01180000_02988807_02995955 | NA | other | downstream | 1396198 | 2987081 ~ 2997401 (-) |
| G680506 | NA | other | downstream | 1538146 | 2771047 ~ 2851916 (-) |
| G680525 | NA | other | downstream | 1773306 | 2616354 ~ 2616756 (-) |
| G683394 | NA | other | upstream | 1227865 | 5618207 ~ 5619271 (-) |
| G683294 | NA | other | upstream | 1360702 | 5751044 ~ 5755526 (-) |
| G683673 | NA | other | upstream | 2371733 | 6762075 ~ 6762844 (-) |
| G684018 | NA | other | upstream | 3012805 | 7403147 ~ 7413132 (-) |
