XLOC_015738


Basic Information

Item Value
gene id XLOC_015738
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007113.7
NCBI id CM002886.2
chromosome length 59640629
location 37967985 ~ 37971044 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00033283
GTTAATTTTCGTCTCACTTTACTCTTTTAACGCAGTTATTTTCCCTCGGAGGTCGGCGGTGTGAATTTGGAGAACATTCTTAAGATGGACAGTGAAGTTTTTAAAATCGAGGAAAATGATGGTGAGCCCTCCACTAGTAAACAGGGCGTGGAAAAAACACAACAGTTTTTGGAACCCAGTGAGAAACCTGATGATAAAGAGTCAAAACTCATGCAGGATATGGGTTCAGGTTTAAATCCAGAAGAGCTAGCTGATGTTGCAGGCCAACCAGTCCTTGGGCAGGTTGATAATAATGAGGTCCTGGAAAAGAAGGTGGCTGAGACACCTAGAGAAGCTAGAGAAGAGGAAAATCCAACAcaaaaaggacaaaaaaagaaACCCAAAAATCCTTTTATGCCTCAGATTGCAGCAAAGaacaaaacaacacAGAAGAAAAATGAAGACCAAAATATTGGAGCTGGCAGTGTTGTTGCAGAGGTACTGTAATATcctaatataaaacataatactCAACAGGCATAAAATGAAAACCGAGAGACTGTAGTGGTTTCAAATATAGGAAAGTTTGATACTACAGGTCAGGATAGTAGATTAACTGTTGGAATTTTTTATGTCTGCAAAGAGTAAGAGCAGTTTGTGTTAGCGTCTGTCTGAGCTTGTTTTCAGCAATTAAACATGCTGAATTGGCTTATGTTGGCTTGTAGAATGTTTGAGAAGTGACGTTTAATCTGGTGCTTATCCATGAGTGTCAGTGTCTGTTGGTGTGG

Function

GO:

id name namespace
GO:0044421 obsolete extracellular region part cellular_component
GO:0031012 extracellular matrix cellular_component
GO:0005576 extracellular region cellular_component
GO:0005581 collagen trimer cellular_component
GO:0005615 extracellular space cellular_component
GO:0004867 serine-type endopeptidase inhibitor activity molecular_function

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00033283 True 767 lncRNA 0.40 7 37967985 37971044

Neighbor

gene id symbol gene type direction distance location
XLOC_015737 LO017954.1 coding upstream 40573 37926380 ~ 37927412 (+)
XLOC_015736 tep1 coding upstream 61867 37897079 ~ 37906118 (+)
XLOC_015735 cbln13 coding upstream 89681 37874771 ~ 37878304 (+)
XLOC_015734 AL954692.1 coding upstream 121136 37836619 ~ 37846849 (+)
XLOC_015733 NA coding upstream 140946 37826734 ~ 37827039 (+)
XLOC_015739 apol1 coding downstream 309 37971353 ~ 37974725 (+)
XLOC_015740 NA coding downstream 3952 37974996 ~ 37990505 (+)
XLOC_015741 NA coding downstream 28735 37999779 ~ 38000194 (+)
XLOC_015742 dcaf8 coding downstream 31673 38002717 ~ 38020603 (+)
XLOC_015743 hnrnpc coding downstream 54216 38025260 ~ 38034190 (+)
XLOC_015725 NA non-coding upstream 660414 37301408 ~ 37307571 (+)
XLOC_015713 dre-mir-2198 non-coding upstream 1214227 36753649 ~ 36753758 (+)
XLOC_015751 NA non-coding downstream 309938 38280982 ~ 38283096 (+)
XLOC_015753 NA non-coding downstream 399491 38370535 ~ 38371944 (+)
XLOC_015755 NA non-coding downstream 444973 38416017 ~ 38422233 (+)

Expression


Co-expression Network