XLOC_015713 (dre-mir-2198)


Basic Information

Item Value
gene id XLOC_015713
gene name dre-mir-2198
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007113.7
NCBI id CM002886.2
chromosome length 59640629
location 36753649 ~ 36753758 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00031294
CGGCGAGCAATACTCATAACTCCCAAGCGCCTGCGAACGCAAGCTCTCCTTACCCCGGTGCAGATGGAGCTCGTGTCCCAAGGCGCCTCCAGGCCTAAACCCGGGCCTGC

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000083762

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00031294 True 110 miRNA 0.64 1 36753649 36753758

Neighbor

gene id symbol gene type direction distance location
XLOC_015712 NA coding upstream 9737 36742343 ~ 36743912 (+)
XLOC_015711 pdcd10b coding upstream 21686 36721357 ~ 36731963 (+)
XLOC_015710 golim4b coding upstream 32360 36701322 ~ 36721289 (+)
XLOC_015709 ptx3b coding upstream 58505 36691771 ~ 36695144 (+)
XLOC_015708 klhl6 coding upstream 94493 36646451 ~ 36659156 (+)
XLOC_015714 nrd1a coding downstream 74485 36828243 ~ 36854500 (+)
XLOC_015715 si:dkey-193b15.8 coding downstream 108715 36862473 ~ 36892883 (+)
XLOC_015716 rabgap1l2 coding downstream 145224 36898982 ~ 36905195 (+)
XLOC_015717 gadd45bb coding downstream 185991 36939749 ~ 36941988 (+)
XLOC_015718 slc1a8b coding downstream 356746 37110504 ~ 37122351 (+)
XLOC_015707 NA non-coding upstream 110887 36638931 ~ 36642762 (+)
XLOC_015702 NA non-coding upstream 170374 36180243 ~ 36583275 (+)
XLOC_015725 NA non-coding downstream 547650 37301408 ~ 37307571 (+)
XLOC_015733 NA non-coding downstream 1072976 37826734 ~ 37827039 (+)
XLOC_015734 AL954692.1 non-coding downstream 1082861 37836619 ~ 37846849 (+)
XLOC_015737 LO017954.1 non-coding downstream 1172622 37926380 ~ 37927412 (+)
XLOC_015738 NA non-coding downstream 1214227 37967985 ~ 37971044 (+)

Expression


Co-expression Network