XLOC_015712


Basic Information

Item Value
gene id XLOC_015712
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007113.7
NCBI id CM002886.2
chromosome length 59640629
location 36742343 ~ 36743912 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00033282
aatgtaatctTAAGCTTGGCTAACAGGAGAATTTGATGTCTCCTTATTCAGACAGAATGgctgagcatactgcccaagaggcgtttcaaagatgaccACTGAGTAAAATTACTTGCCTTTAGGGACTTtggctaaactctgcaggacagtggaCAGACCTCCCTGGTTGTAGAGAACAACTGAATTTGGACTggacatacacactcacaaaagCACAGAGACATTTTGGGAAAATTGGGATGACATGATGgagaggtcagaggtcagcctGGCTCCTGGCAATCTCAAACGCTCGCTTACAAATCACTGCGGAGTTTCAGCCTATACTTTATGGACACCAGCTGATAAAGGTTTTGCTTTTAAAACACATCTTGTTTGTGCACCATCCCAAgatttacttatatatatattattagaaatTCTAAAGTTATGCAGATTAAAAATACACAGTGCAAAAAAATATAAGCGACTTGTccacattaataaaacattttg

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00033282 True 495 lncRNA 0.39 2 36742343 36743912

Neighbor

gene id symbol gene type direction distance location
XLOC_015711 pdcd10b coding upstream 10380 36721357 ~ 36731963 (+)
XLOC_015710 golim4b coding upstream 21054 36701322 ~ 36721289 (+)
XLOC_015709 ptx3b coding upstream 47199 36691771 ~ 36695144 (+)
XLOC_015708 klhl6 coding upstream 83187 36646451 ~ 36659156 (+)
XLOC_015707 NA coding upstream 99581 36638931 ~ 36642762 (+)
XLOC_015713 dre-mir-2198 coding downstream 9737 36753649 ~ 36753758 (+)
XLOC_015714 nrd1a coding downstream 84331 36828243 ~ 36854500 (+)
XLOC_015715 si:dkey-193b15.8 coding downstream 118561 36862473 ~ 36892883 (+)
XLOC_015716 rabgap1l2 coding downstream 155070 36898982 ~ 36905195 (+)
XLOC_015717 gadd45bb coding downstream 195837 36939749 ~ 36941988 (+)
XLOC_015702 NA non-coding upstream 159068 36180243 ~ 36583275 (+)
XLOC_015725 NA non-coding downstream 557496 37301408 ~ 37307571 (+)
XLOC_015733 NA non-coding downstream 1082822 37826734 ~ 37827039 (+)
XLOC_015734 AL954692.1 non-coding downstream 1092707 37836619 ~ 37846849 (+)
XLOC_015737 LO017954.1 non-coding downstream 1182468 37926380 ~ 37927412 (+)
XLOC_015705 NA non-coding upstream 177870 36552692 ~ 36564473 (+)
XLOC_015704 NA non-coding upstream 271233 36379239 ~ 36471110 (+)
XLOC_015703 NA non-coding upstream 494874 36244922 ~ 36247469 (+)

Expression


Co-expression Network