XLOC_015710 (golim4b)


Basic Information

Item Value
gene id XLOC_015710
gene name golim4b
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007113.7
NCBI id CM002886.2
chromosome length 59640629
location 36701322 ~ 36721289 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00031292
gaaaaagcCAATTCATAGCCATTAGTCGGACTTACTTTTTCCGTAAGGGCTAAGTAGCCTATAATTACAGCTAGCTGTAAGAGAAAAGTATGTAAGAAAGCAACTGGTGCGTCCATTAAAGGGACAGCAACGcgagcagaaaaaaataaacagacggATCATTGTGGCTTTCCTAAACATTTACGTCTCTGAAGAATCGGATGGCACATAGTCTATACTGTCTACTCaagaagaggaggaaaaaagATGGGGAAAGGGATTTGTTCGAGACGACAGAGAAGAATATTTCAGTCTTTCCTCCTTGTCATCTTCGTCTGCGGGACGTTGTGCGCCTTCATGATCTCATATGAGATGCATAAAGAGCTGAAAAAGACTGAGGCGACCGCTTTGAAGTACCAGCAGCATCAAGAGTCTCTTTCTGCGCAGCTGCAAGTTGTATACGAACACCATTCTAAACTAGAGAAATCCCTCCAGAAAGAAAGACTAGAGCACAAGAAGGCTGAAGAGGATTTCCTCGTGTTTAAGCGGGAGTCACAGAAGGCCCTCAACAAAGAGAAGCAAGATTCAACCTATCGACTGAATTCTCTGCAGACAGAGCACCAAATACTGCAGTCCCAACATGAAGATTTGAAGATGCAGTACTATGAGCTTCAAGAGAAGCATCAGAATCAAGGGCAGGATCATGAGCGTGTTCTGGATGAACACAGGCTGAAAATAGACAACCTGCAGAGGGAAAAGGAGGTTGAAATATCCAGACTTAAAGAGAACGTGTACAACCTTCGAGAGGAGAACCGACAGCTGCGGAAAGCTCATCAGGATATCTACGCGCAGTTACTTGACGTGCAGGAACAGCACAAGAATCTGCAAGCTTCAAAAGACCATCTCTCACTGGCATTAGAAGACCATAAAAATGCAGTTGTTGCAGCCCAGGTGGAAGGATATGAGGGAAATGGAAAAGGCTTTTCCCCTCGAGGTGTGTTGGAGATTGAAAATAACAATGTGACCAAAGTGGCAATGAAGCAGCCTCGGCAAATTGATATTTTTGCTGAGGGAAACGGCAAGAAAGAGGAGAGAAGCACATCAAAGGATAGAGGAGGAGAGGATAAGGGGGAAAAGGCAGAGCTGGAACATTCCTTATCAAACCCAGAAGAGCTGGGCATTAACCCTCGCAACACGTTAAGCCAAAGCCTGGAGAAACAGACACAGACGGAGCCACTTCACACAACCAAAGCGCACTTTGAGGCTTTGGAACCAGTTCTTGCTGGCAATGCTGTGCAAACACTCCTTGGTATGGCAGGACAAGATGCAGCAAAACATGTGGAGGATGCTCaaaaacagGGCATAGGGAAAAACTTGAACACAGAGATTGAGGCCAACAACCAGAACGAAGAAGAGGATGAAGAAGAAACCGAGTACAAGACTAATGCGGACAAGATCAGACCTGAAGAGGATGAACAGCTTGTGGTGGCAGGCAATCCAGAGCCGGATGAGCAATATGTGGACGATGTGGAGGAAGAGACTCTTGATGAATCCGTTCTTAACAGACAGAAGAGAGCGGAGGAAGACGAGAGCGAAGAAGATCTCTACACTGAACGTGATGGAGTACAGGATCATGCAAACCCAGAATCAGAAACGTTTGCCAATCAGGAGTACTTTaaagaaaaactaataaaaagaggatgaaagaggaaaaaagaaatcaaaagaCTGAGATGTCCTGTCTTCTGAGTGGCTTTACACATCTCTTCTTGACTGGCGGAAACTTAAAGTACAACTGCAACAACTCTAAAGAACTGACTACTTGTGCTTATGCAAGACTTATGCAAGGATTTgttcagcatttatttttaatcaaggCTTTGTGTCTTCTTGATCTTACTAAGGCGATAGGAACTGGCATCCTGCTGATATGCATTCAATATGTCGatgaatatttgaatgatttcttTTGGGCAGaaaagtaattattatttattttttgttttaaatattcattcagtTCTTCACTTGtaagaaacaagtaaaatgtgtttaaaataattttcacttATATTTTCACTTTATTAAAAGTAGTAATGCATTATTGGAACAACAAAGAAGAGgaacaaatgaaaatgtattgcaaagctttttgtgtttttatactttttaactTGTAGTACTTTTCCTGTGGTGAGTTATACTTTATTGTGAAAACTTGCACATTGGGACTAAACTTGCAAGAAACTCAAGTATTTTTGGAACTGTAGTTTTCATGTACACTGAATTACATTCAAACAGTTGCTTTTTACGTATTTACATGAAGCCAAACgaatatttttgttcatttttttttagatattgttGAAAAGAATAATATCAAAATGGTGCTTTAGTTAACCCCCTTTTCTCCCAACTCTTCGCGTTCTCATTTATATGAATGTGatctgtatttgttcatgcaaatgagatgctgtgtttattgtttttctaaTAAAGATTTTACAAT

Function

symbol description
golim4b Predicted to be located in Golgi membrane. Predicted to be integral component of membrane. Orthologous to human GOLIM4 (golgi integral membrane protein 4).

GO:

id name namespace
GO:0008150 biological_process biological_process
GO:0000139 Golgi membrane cellular_component
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0003674 molecular_function molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-050327-74 Predicted to be located in Golgi membrane. Predicted to be integral component of membrane. Orthologous to human GOLIM4 (golgi integral membrane protein 4).

Ensembl:

ensembl_id ENSDARG00000014545

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00031292 True 2488 mRNA 0.40 13 36701322 36721289

Neighbor

gene id symbol gene type direction distance location
XLOC_015709 ptx3b coding upstream 6178 36691771 ~ 36695144 (+)
XLOC_015708 klhl6 coding upstream 42166 36646451 ~ 36659156 (+)
XLOC_015707 NA coding upstream 58560 36638931 ~ 36642762 (+)
XLOC_015706 ing5b coding upstream 64456 36606019 ~ 36636866 (+)
XLOC_015705 NA coding upstream 136849 36552692 ~ 36564473 (+)
XLOC_015711 pdcd10b coding downstream 68 36721357 ~ 36731963 (+)
XLOC_015712 NA coding downstream 21054 36742343 ~ 36743912 (+)
XLOC_015713 dre-mir-2198 coding downstream 32360 36753649 ~ 36753758 (+)
XLOC_015714 nrd1a coding downstream 106954 36828243 ~ 36854500 (+)
XLOC_015715 si:dkey-193b15.8 coding downstream 141184 36862473 ~ 36892883 (+)
XLOC_015702 NA non-coding upstream 118047 36180243 ~ 36583275 (+)
XLOC_015725 NA non-coding downstream 580119 37301408 ~ 37307571 (+)
XLOC_015733 NA non-coding downstream 1105445 37826734 ~ 37827039 (+)
XLOC_015734 AL954692.1 non-coding downstream 1115330 37836619 ~ 37846849 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000004_14919607_14929407 GOLIM4B coding CI01000004 null 14919475 ~ 14929407 (+)