XLOC_016357 (si:dkey-58b18.2)


Basic Information

Item Value
gene id XLOC_016357
gene name si:dkey-58b18.2
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007113.7
NCBI id CM002886.2
chromosome length 59640629
location 23542636 ~ 23546627 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00032214
TACTCACAATCCACTGTAGTGTGAAGATATACGAAGACTTTCTTCGTCTTTACTGACAGTTATTTGTTCGTAGATTTGTGCTTTTCAAATTGTTAACTATTTactctttaaaatgtttacattactCGGAGTAATTGCTTTAGTCCTGCGGGGAAGGACAGAAAACAAACCCCATCGAGAAGAACCCGTGGAGAAAAACTCTCCACCCACGATGACCAGTGATGGTCGAGATATTGATGATAGGACTGTACACCTGTCATCGGAGGAACCAAGCACCAGTGGTTGTCCAGTCCATGTTGACGACCACAGTGATGTCCTTCATTCTCCCATCACTGCACCGACCCTCCAAACTCCAGACCATGCTGCAGCTCAAAGTGTTGACGACGTCCCTACAGCCTGTGCCACGTCCGACTGTAGTGAGGATGATGTCCTTCAAGCTGCAGTGCCTTTGCTAGCTGACTTGTGTGCACGTGTTCTTCAGGACACTGAGCCACAGTCATGCCAGCAGCAGGATATGGAGAAAACTGTGACTGgtCGAGATATTGATGATAGGACTGAATACCTGCTATCGGAGGAACTAAGCACCAGTGGTTGTCCAGTCCGTGTTGACGACCACAGTGATGTCCTCCAATCTCCCAGCACTGAACTGACCCTCCAAACTCCAGACCATGCTGCAGCTCAAAGTGTTGACGACGTCCCTACAGCCTGTGCCACGTCCGACTGTAGTGAGGATGATGTCCTTCAAGCTGCAGTGCCATCAGTTCCTCAGGAGAAGGAGAA

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000111054

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00032214 True 780 mRNA 0.49 3 23542636 23546627

Neighbor

gene id symbol gene type direction distance location
XLOC_016356 si:dkey-58b18.3 coding downstream 1577 23540185 ~ 23541059 (-)
XLOC_016355 si:dkey-58b18.10 coding downstream 3842 23537868 ~ 23538794 (-)
XLOC_016354 si:dkey-58b18.5 coding downstream 27052 23511594 ~ 23515584 (-)
XLOC_016353 si:ch211-14p21.3 coding downstream 62922 23475723 ~ 23479714 (-)
XLOC_016351 NA coding downstream 99447 23406472 ~ 23443189 (-)
XLOC_016358 si:dkey-58b18.10 coding upstream 22280 23568907 ~ 23569833 (-)
XLOC_016359 si:dkey-58b18.6 coding upstream 24603 23571230 ~ 23572104 (-)
XLOC_016360 si:dkey-58b18.5 coding upstream 27055 23573682 ~ 23577672 (-)
XLOC_016361 si:dkey-58b18.10 coding upstream 53269 23599896 ~ 23600821 (-)
XLOC_016362 si:dkey-58b18.9 coding upstream 55836 23602463 ~ 23603061 (-)
XLOC_016347 BX548024.1 non-coding downstream 455312 23084639 ~ 23087324 (-)
XLOC_016346 NA non-coding downstream 515574 23025245 ~ 23027062 (-)
XLOC_016343 BX649390.1 non-coding downstream 645235 22897285 ~ 22897401 (-)
XLOC_016341 NA non-coding downstream 673916 22857105 ~ 22868720 (-)
XLOC_016369 NA non-coding upstream 479942 24026569 ~ 24069434 (-)
XLOC_016370 CR788285.1 non-coding upstream 529386 24076013 ~ 24105475 (-)
XLOC_016372 dre-mir-736 non-coding upstream 714590 24261217 ~ 24261296 (-)
XLOC_016374 NA non-coding upstream 764008 24310635 ~ 24317436 (-)
XLOC_016381 BX530024.2 non-coding upstream 959348 24505975 ~ 24506090 (-)

Expression


Co-expression Network