XLOC_016358 (si:dkey-58b18.10)


Basic Information

Item Value
gene id XLOC_016358
gene name si:dkey-58b18.10
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007113.7
NCBI id CM002886.2
chromosome length 59640629
location 23568907 ~ 23569833 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00032215
ACTTCCAATGGAGGTTGCTCTTTTAGTTCTTGCAAACCAAGAGCCCGCAATACAGGAAATAATTAAGCTTTTGGACTGGCGCGTGGATGAGGACGAATACATCATGGTCCTAGAGCGGCCCATGCCCTCTGAAGAGCTGCTCTCCTTTCTCCTGCGCCAAGAGTCGATCATCGATGAGGATGGGGCACGGTTGATCATGTGGCAGGTAATATTTGCAGCTCAAACGTGCTGCAGACGCAAAGTCTTTCATCGCGATATCAAGATGGAGAACATCCTGATCAACCCGGACACCCTCGAAATCAAATTGATCGACTTTGGATGCGGGGAAATCCTCACCGATGCTCCTTACACAAGTTTTGCTGGCACAGATGACTATGTCCCACCTGAGTATCGGATAACTGGCGAGTACCACGGTAAAACAACGACAGTGTGGTCTCTTGGGCTACTCCTTTATGTGATGATGTGTGGAGATTTTCCAAATCGACACGACCTGCAAATGATCAGACGTAACATCTGGACCAAAGATCACTTGACAAAAGAATGCTGTGATTTGATCCGCTGCTGTctccagatcgagccagagcagCGAATTGAACTTGAGAAACTGAGTCTCCATGACTGGTTTACGGTATTATTTACATTCTGA

Function

symbol description
si:dkey-58b18.10 Predicted to enable protein serine/threonine kinase activity. Predicted to be involved in negative regulation of apoptotic process; protein autophosphorylation; and regulation of mitotic cell cycle. Predicted to act upstream of or within protein phosphorylation. Predicted to be active in cytoplasm.

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000116868

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00032215 True 646 mRNA 0.47 3 23568907 23569833

Neighbor

gene id symbol gene type direction distance location
XLOC_016357 si:dkey-58b18.2 coding downstream 22280 23542636 ~ 23546627 (-)
XLOC_016356 si:dkey-58b18.3 coding downstream 27848 23540185 ~ 23541059 (-)
XLOC_016355 si:dkey-58b18.10 coding downstream 30113 23537868 ~ 23538794 (-)
XLOC_016354 si:dkey-58b18.5 coding downstream 53323 23511594 ~ 23515584 (-)
XLOC_016353 si:ch211-14p21.3 coding downstream 89193 23475723 ~ 23479714 (-)
XLOC_016359 si:dkey-58b18.6 coding upstream 1397 23571230 ~ 23572104 (-)
XLOC_016360 si:dkey-58b18.5 coding upstream 3849 23573682 ~ 23577672 (-)
XLOC_016361 si:dkey-58b18.10 coding upstream 30063 23599896 ~ 23600821 (-)
XLOC_016362 si:dkey-58b18.9 coding upstream 32630 23602463 ~ 23603061 (-)
XLOC_016363 si:dkey-58b18.8 coding upstream 34821 23604654 ~ 23609082 (-)
XLOC_016351 NA non-coding downstream 125718 23406472 ~ 23443189 (-)
XLOC_016347 BX548024.1 non-coding downstream 481583 23084639 ~ 23087324 (-)
XLOC_016346 NA non-coding downstream 541845 23025245 ~ 23027062 (-)
XLOC_016343 BX649390.1 non-coding downstream 671506 22897285 ~ 22897401 (-)
XLOC_016341 NA non-coding downstream 700187 22857105 ~ 22868720 (-)
XLOC_016369 NA non-coding upstream 456736 24026569 ~ 24069434 (-)
XLOC_016370 CR788285.1 non-coding upstream 506180 24076013 ~ 24105475 (-)
XLOC_016372 dre-mir-736 non-coding upstream 691384 24261217 ~ 24261296 (-)
XLOC_016374 NA non-coding upstream 740802 24310635 ~ 24317436 (-)
XLOC_016381 BX530024.2 non-coding upstream 936142 24505975 ~ 24506090 (-)

Expression


Co-expression Network