XLOC_016392 (si:dkey-149i17.11)


Basic Information

Item Value
gene id XLOC_016392
gene name si:dkey-149i17.11
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007113.7
NCBI id CM002886.2
chromosome length 59640629
location 24902808 ~ 24907741 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00032285
TACTCACAATCCACTGTAGTGTGAAGATATACGAAGACTTTTTTTCGTCTTTACTGACAGTTAATTGTTCGTAGATTTGTTGTACGTTTGAAATTTTCCCGTTTTTAAGActctttaaaaatgttaacattactCGGAGTAATTGCTTTAGTCCTGCGGGGTAGGACAGTAAACGAACCCCACCCAGATCGAGAAGAACCCGTGGAGAAAAACTCTCCACCCACGATGACCAGTGATGGTCGAGAAATCAATGGCAGGACTGAACACCTGTCATTGGAGGAACTAAGCACCAGTGGCTGTCCAGTCTATGTTGACAACCACAGTGATGTCCTCCATTCTCCCATCACTGCACCGACCTTGCAAACTCCAGACCATGCTGCAGCTCAAAGTGTTGACGACATCCCTACAGCCTGTGCCACGTCCGACTGTAGTGAGGATGATGTCCTTCAAGCTGCAGTGCCTTTGCTAGCTGACTTGTGTGCTCGTGTTCTTCAGGACACTGAGCCACAGTCATGCCAGCAGCAGGATATGGAGAAAACTGTGACTGGTCGAGAAATTGATGGCAGGACTGAACACCTGTCATCGGAGGAACCAAGCACCAGTGGCTGTCCAGTCCATGTTGACGACCACAGTGATGTCCTCCAATCTCCCAGCACTGCACCGACCCTCCAAACTTCAGACCGTGCTGCAGCTCAAAGTATAGACAACGTTCCTACAGCCTGTGCCACGTCCGACTGTAATGAGGATGATGTCCTTCAAGCTGCAGTGCCTTCATTTCCTCAGGAGAAGAAAACAATTTTC

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000097081

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00032285 True 801 mRNA 0.48 3 24902808 24907741

Neighbor

gene id symbol gene type direction distance location
XLOC_016391 si:dkey-149i17.8 coding downstream 896 24900571 ~ 24901912 (-)
XLOC_016390 si:dkey-149i17.9 coding downstream 4582 24896992 ~ 24898226 (-)
XLOC_016389 NA coding downstream 73599 24829004 ~ 24829209 (-)
XLOC_016388 NA coding downstream 203644 24678696 ~ 24699164 (-)
XLOC_016387 crtc1a coding downstream 299483 24578053 ~ 24603325 (-)
XLOC_016393 hltf coding upstream 36299 24944040 ~ 24962820 (-)
XLOC_016394 nck1a coding upstream 56120 24963861 ~ 24981356 (-)
XLOC_016395 slc35g2a coding upstream 82657 24990398 ~ 24996441 (-)
XLOC_016396 pccb coding upstream 200828 25108569 ~ 25120197 (-)
XLOC_016397 nceh1a coding upstream 223608 25131349 ~ 25143373 (-)
XLOC_016386 NA non-coding downstream 330114 24568889 ~ 24572694 (-)
XLOC_016385 NA non-coding downstream 337515 24555017 ~ 24565293 (-)
XLOC_016383 NA non-coding downstream 356867 24545480 ~ 24545941 (-)
XLOC_016398 CR786576.2 non-coding upstream 248101 25155842 ~ 25155958 (-)
XLOC_016400 NA non-coding upstream 257509 25165250 ~ 25174020 (-)
XLOC_016402 NA non-coding upstream 874958 25782699 ~ 25816832 (-)
XLOC_016403 NA non-coding upstream 944938 25852679 ~ 25858506 (-)
XLOC_016405 CR392012.2 non-coding upstream 1146372 26054113 ~ 26057912 (-)

Expression


Co-expression Network