XLOC_016414 (si:ch211-106k21.5)


Basic Information

Item Value
gene id XLOC_016414
gene name si:ch211-106k21.5
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007113.7
NCBI id CM002886.2
chromosome length 59640629
location 26518813 ~ 26527730 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00032326
ggcagatgGAGCTGCTGCTGCTCTGAGTGCTCTGGGTTGCGGTCATctgaatgaatgacagctctACCAACAGCTCACAACAATGACACGTGAAGGACTTGTCTTTTTATGTGGGTTTGGGTTTCTCCAAATGCTGCATGTGACTGAAGGAAACACCGGAGGATGCAAGTGTCCACCTTCCAGCATTTTGTCTAAGTTTCCACCTCTGATACCCAACGACACTTGCTGCTTGAACTACTCAGGATCTACGTTCAGCCTAGTGCCCTGGGCAGCTTTTTCATCGCAGACAAATCTGCAAGTTTTGGACTTGTCTAACTGTAATATCAGTAAGATTGAAGACGGTGATGCTGTCAGTTCATTGAGAGAGCTGTACCTCAGCCAGAACAGACTCACATCTCTCCCAAATGGCTTCCTCACAAAAGCCTATAGTTTGGAAGTGCTGGATTTGGGAGTGAATAATCTGAAGGACTTGCCCAAGCGATTTCTCCAAAGCTCGCATAAACTACGAGAGCTGATCTTGGGCTGGAACCAGCTGAGCGCTCTTCCTCAGTCATCACTAAAGCCTTCACTACAACATCTAGAGCTCGTTGGAAACCCCTTGGCCTGCACGTGTTCGCTGTGGGAAGGTCTTCGAAGTCATCTTCATGACAACTCCAGCAGCTTTCAGGACCTCGTAGGTAATCTGACCTGTGCCTCTCCTCACATTCTGGC

Function

GO: NA

KEGG: NA

ZFIN:

id description
ZDB-GENE-070912-7 No description available

Ensembl:

ensembl_id ENSDARG00000086052

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00032326 True 711 mRNA 0.49 2 26518813 26527730

Neighbor

gene id symbol gene type direction distance location
XLOC_016413 best4 coding downstream 9756 26504969 ~ 26509057 (-)
XLOC_016412 BX569796.4 coding downstream 18971 26499502 ~ 26499842 (-)
XLOC_016411 acadm coding downstream 42663 26470070 ~ 26476150 (-)
XLOC_016410 rabggtb coding downstream 49720 26463114 ~ 26469093 (-)
XLOC_016409 CT027702.1 coding downstream 82700 26434936 ~ 26436113 (-)
XLOC_016415 glis1a coding upstream 1717 26529447 ~ 26563978 (-)
XLOC_016416 ndc1 coding upstream 49123 26576853 ~ 26590628 (-)
XLOC_016417 zgc:113691 coding upstream 64238 26591968 ~ 26596794 (-)
XLOC_016418 yipf1 coding upstream 71071 26598801 ~ 26604318 (-)
XLOC_016419 tmem59 coding upstream 84844 26612574 ~ 26620902 (-)
XLOC_016408 NA non-coding downstream 230981 26286460 ~ 26287832 (-)
XLOC_016407 NA non-coding downstream 245481 26192709 ~ 26273332 (-)
XLOC_016406 CR392012.3 non-coding downstream 433534 26085162 ~ 26085279 (-)
XLOC_016405 CR392012.2 non-coding downstream 460901 26054113 ~ 26057912 (-)
XLOC_016421 dre-mir-124-1 non-coding upstream 117587 26645317 ~ 26645398 (-)
XLOC_016424 BX511023.2 non-coding upstream 511958 27039688 ~ 27039804 (-)
XLOC_016425 BX649522.2 non-coding upstream 705936 27233666 ~ 27233781 (-)
XLOC_016429 NA non-coding upstream 860836 27388566 ~ 27390098 (-)
XLOC_016430 NA non-coding upstream 935655 27463385 ~ 27464441 (-)

Expression


Co-expression Network