XLOC_017800 (prkg3)


Basic Information

Item Value
gene id XLOC_017800
gene name prkg3
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007131.7
NCBI id CM002904.2
chromosome length 55201332
location 616114 ~ 641511 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00035180
TGAGACATCTCAGATCGTGAAGGCCATTGGGAAGAATGACTTTCTTCGTCGTCTGGATGAGGAACAGATTAGCATGATGGTGGATCTGATGAAGGTTCTGGACTGCCGTGCGGGTGATGAAATTATCAAAGAGGGCACGGAGGGAGACAGCATGTACATTGTTGctgCGGGGGAGCTGAAGGTTACTCAGGCTGGACGTGATTTGCGTATTTTGAGCCCTGGAGATATGTTCGGGGAACTGGCCATTCTATACAACTGCAAACGAACAGCATCAGTCAAAGCCATCTCTGCGGTAAAGTTATGGTGTATCGAGAGACAAACGTATCGGAGCATCATGACCAACAAATCCAAGATGAAACGAGAGCAGCTGATGGGCTTCCTGAAAACGGCGCGCACTTTGAAGGCTCTGAATGATGTGCAGTTGTCAAAAATCATCGACTCCATGGAAGAAGTGAGATTTCAGGACAATGAAGTGATTGTCAGAGAAGGAGCAGAGGGCAACACTTTCTATATCATTCTCAAAGGGGAGGTGTTAGTGACGAAAAAAGTCAACGGCCAGCAGAAAACCATCCGTAAAATGGGCGAAGGGGAACACTTTGGAGAGCTGGCTCTCATACGAGAGATCCTCAGGACAGCCACGTGCACGGCTGTGGGAGTCGTCATTTGCTTTTCAATCGATAAAGATGCTAATGTCTCGGAGATTGATGAAAAGCCAGAGAAAGCTCGGCCGGAAACATCTCTAAAGCTGAAAGATCTCGTCCCCGTTCTGTACCAGGAGGGAAGTTATCAAGGAGATCCCGTCACTCTTGGAATCGGCGGTTTTGGAAAAGTGGAGCTGGTAACCACCCTGGAGCACAGAAAGTACTTTGCGATGAAGAGGATCAGTAAACAGCATGTTGTTGCGAAGAAGCAGGAGGCTCACATTCTGCTGGAAAAGAAAATTCTCCAGGCTATCCGATGCGATTTCATTGTCAGGCTGCATGCTGCCTTCAAAGACTCACGCTACGTCTACATGATAATGGAGTTTTGTCCTGGTGGGGAAATCTGGACTAAACTGAAAGAAGCAGGACGCTTTGAGGAGAAAATAGCCGTGTTCATAACAGCGTGTGTGGTGGAAGCCTATGCATACCTCCATAACAAAGGGATCCTGTACCGAGACCTGAAACCAGAAAACCTCATGCTGGACTCTAAAGGATATGTGAAACtggtTGATTTTGGTTTTGCAAAAGAGCTTTCTCGGGGTGAAAAGACATACTCGTTTTGCGGCACACCTGAGTATATCTCTCCAGAGATCATTCAGAACCAGGGCCATGACATCGCTGCAGACTTCTGGTCGCTTGGTGTTCTAATCTACGAGCTTCTTGTGGGCAGCCCACCCTTCTCCAGTTCAGAGCCGCAGAAGATCTATGCCAAAATCTTGGATGGAGTGCTGAATTTCCCTTCATATATGGGTGAAGGTGCCAAATCTATCATCAGTAAACTGTGCAGGCTGCGTCCTGGACAGCGTTTGGGCAACACGAAAAATGGAATCAAAGATGTGCGACATCACAGGTGGTTTAATAGCATTAACTGGCATAAATTAAGAATGGGGCAGCTGGAGGCACCGACGGTTCGGCTCATAAGAAAGGGTCCTTGCTATATAAACTTCGACCGCTTTCCTTATGACAAGACCCAGGCGGAGGAGGAATTCTCAGGCTGGGATTGTGACTTCTGAACAACTGCCAAGTAGTCTTAAGATCTCCAACATATCTCAAACTCTCAGGTTATCTCATGTTTAACACCCATAGCATATCTTAGTGGAAGATCAGTACTTTCTGACGATTGGTATATGACCGAACTTTAGTATCTTTCcacaaagagaaagtaaaagagTTCTTTGCAGGACTTGTGCTAGTGAGGTGTCAAATGCCCATTTCAAATGCATTGTTTTTATTCTGAAGTGATTTCAGACACTGTGATTCATAGGAGCTAGAGAAAACTGGAGCCAACTTTGCACTAGAAAcagtgaaaattattattatttttcaatgtaatgtaaaaatagaCATTGGGATTTGTCTCCATTGTCGTACACGATACCTTATGTACATGCACTTGTCAGACTATTCATGTTTAGGCGAATCAGTCAGATTATAATGTACAttctttatttacttgtttaatgaGCCAAATGTTATCCATGAACTGTCATTAGTAACTGGATGTTGAGACTTTTATGtgtaatttattttcagtaatttgTTTTTGTGGCAACCACAAAGCTTTAGTTTTTCAGTCAAAGGACTGTGATGTCATTGTGGTGTTGTACTTTTGTTGTTGATGTATTATAATAAAgaattaggcccaatcccaa
>TCONS_00035181
ATGATTTGTGCTGTCTCCAGGCCGGAAACATCTCTAAAGCTGAAAGATCTCGTCCCCGTTCTGTACCAGGAGGGAAGTTATCAAGGAGATCCCGTCACTCTTGGAATCGGCGGTTTTGGAAAAGTGGAGCTGGTAACCACCCTGGAGCACAGAAAGTACTTTGCGATGAAGAGGATCAGTAAACAGCATGTTGTTGCGAAGAAGCAGGAGGCTCACATTCTGCTGGAAAAGAAAATTCTCCAGGCTATCCGATGCGATTTCATTGTCAGGCTGCATGCTGCCTTCAAAGACTCACGCTACGTCTACATGATAATGGAGTTTTGTCCTGGTGGGGAAATCTGGACTAAACTGAAAGAAGCAGGACGCTTTGAGGAGAAAATAGCCGTGTTCATAACAGCGTGTGTGGTGGAAGCCTATGCATACCTCCATAACAAAGGGATCCTGTACCGAGACCTGAAACCAGAAAACCTCATGCTGGACTCTAAAGGATATGTGAAACtggtTGATTTTGGTTTTGCAAAAGAGCTTTCTCGGGGTGAAAAGACATACTCGTTTTGCGGCACACCTGAGTATATCTCTCCAGAGATCATTCAGAACCAGGGCCATGACATCGCTGCAGACTTCTGGTCGCTTGGTGTTCTAATCTACGAGCTTCTTGTGGGCAGCCCACCCTTCTCCAGTTCAGAGCCGCAGAAGATCTATGCCAAAATCTTGGATGGAGTGCTGAATTTCCCTTCATATATGGGTGAAGGTGCCAAATCTATCATCAGTAAACTGTGCAGGCTGCGTCCTGGACAGCGTTTGGGCAACACGAAAAATGGAATCAAAGATGTGCGACATCACAGGTGGTTTAATAGCATTAACTGGCATAAATTAAGAATGGGGCAGCTGGAGGCACCGACGGTTCGGCTCATAAGAAAGGGTCCTTGCTATATAAACTTCGACCGCTTTCCTTATGACAAGACCCAGGCGGAGGAGGAATTCTCAGGCTGGGATTGTGACTTCTGA

Function

symbol description
prkg3 Predicted to enable ATP binding activity; cGMP binding activity; and cGMP-dependent protein kinase activity. Predicted to act upstream of or within protein phosphorylation. Is expressed in gall bladder; intestine; kidney; ovary; and testis.

GO:

id name namespace
GO:0006468 protein phosphorylation biological_process
GO:0016310 phosphorylation biological_process
GO:0016740 transferase activity molecular_function
GO:0005524 ATP binding molecular_function
GO:0000166 nucleotide binding molecular_function
GO:0004672 protein kinase activity molecular_function
GO:0004674 protein serine/threonine kinase activity molecular_function
GO:0016301 kinase activity molecular_function
GO:0004692 cGMP-dependent protein kinase activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-030131-4745 Predicted to enable ATP binding activity; cGMP binding activity; and cGMP-dependent protein kinase activity. Predicted to act upstream of or within protein phosphorylation. Is expressed in gall bladder; intestine; kidney; ovary; and testis.

Ensembl:

ensembl_id ENSDARG00000014232

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00035180 False 2353 mRNA 0.44 17 616114 641511
TCONS_00035181 True 1008 mRNA 0.48 9 616753 630637

Neighbor

gene id symbol gene type direction distance location
XLOC_017799 NA coding downstream 82038 530511 ~ 534076 (-)
XLOC_017798 col10a1b coding downstream 128331 484256 ~ 487783 (-)
XLOC_017797 frk coding downstream 152328 441942 ~ 463786 (-)
XLOC_017796 ufl1 coding downstream 177468 418513 ~ 438646 (-)
XLOC_017795 NA coding downstream 204195 408561 ~ 411919 (-)
XLOC_017801 impg1a coding upstream 137097 778608 ~ 791788 (-)
XLOC_017802 impg1a coding upstream 161597 803108 ~ 805245 (-)
XLOC_017803 snx14 coding upstream 210072 851583 ~ 894374 (-)
XLOC_017804 cnr1 coding upstream 260901 902412 ~ 915234 (-)
XLOC_017805 rngtt coding upstream 302368 943879 ~ 1120056 (-)
XLOC_017928 CU539064.1 misc upstream 9411894 10053405 ~ 10053701 (-)
XLOC_017794 NA non-coding downstream 210748 403316 ~ 405366 (-)
XLOC_017787 NA non-coding downstream 499115 84692 ~ 116999 (-)
XLOC_017809 BX248418.2 non-coding upstream 556568 1198079 ~ 1198709 (-)
XLOC_017817 NA non-coding upstream 1103714 1745225 ~ 1763478 (-)
XLOC_017819 NA non-coding upstream 1417427 2058938 ~ 2090789 (-)
XLOC_017821 NA non-coding upstream 1494384 2135895 ~ 2140246 (-)
XLOC_017822 NA non-coding upstream 1645161 2286672 ~ 2288716 (-)

Expression


Co-expression Network