XLOC_018314 (pkib)


Basic Information

Item Value
gene id XLOC_018314
gene name pkib
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007131.7
NCBI id CM002904.2
chromosome length 55201332
location 40371897 ~ 40451115 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00036052
GGTGTCAGAGAGAAGGAGAATCACGACGAAGATGGTCTCGATACGCGGAGTTCCCCTCATGGATAGCCTCTGTTGGTACTGATTTGAGTGTTTCTCCCGGATAACTCTGCTTCGAGGAGTTACTTCGTATTCGGAATGATGCTATGAAGACCACCAGAGATGACTGATGTGGAACCTGTTGTCTCTGACTTTGCAGCCACGGGCAGGACTGGCCGGAGGAATGCATTGCCAGACATTCTAGGTTCCACGGCTGGTCCTGGAGCCGCCGACCTACCTGATAAACTAGCCGAACTCACAGTAGGAGaTGATGGTGAACAGGGTGGAGAGAGCTCATCCTCAACCGACCCACCCAAAGAATCCACAGAGGGGGCAAAGACAGAGGGTTCATAAGTCGACAGCATGTCCCGACGCGATCTGACCTCACGATCTGCCTCTATTCTTGTCCCATTGACCAAACAACTGTTACAGTCTGTGCTATGCAACATCAAGACCACTGAGGATTGGCATTCAGACATGGCCCAGCGGGAAAAACAGCTCATTCCCATAACAGGAATCCACCCGAAGTTgcgtttttttcccccaaatagcAACGattgttcatttcattttgtaCCTCTACAACTTCTTTCCAAAGACTCACCAGACTCATGATTTTCCAAACAACCCagctgttttgtgtgttttatgaaAACAGATGTGACCTGCTTTCCCATTTTAAAAGaacattcatttcatttgtttttaggaCTGCCCCCTTTTGCATTTTCTCTGAATGTTGACATGTAGTGGCGAAAAAAAAGATCTCTTTttgcacaaaaaaacaacaaacaaaaacagtaaatACATTCCATTTGGTGGCGTTTTTTTAATCTTACGATAAATCCGTCTGTCCTTGTACAACAACACTACATCCTCTGTGTTTTGTATTGTAAAGATATGCATTGTTAACGTTCTAGAGGAAAAGAATAACAGTGCTGAACTACATGAAATATGATATTTTCTTCTTGTAAATATACAGAATTGTACATTATATTTGCTAGTATGTTTAAAAAGCCTTTTGTTGTGTGCGTAAACGCTGTCAGTGTTGCCCTGTGTGAGCTGAAATTGGATTGTTAGTTGTCGGATGTATCGCCGCAAAACATCTTGTGGTCATTCGGACATGGTTTTTAAGTGCTAGTCTCAGATATTTCTTTGCTGTTGTTGGTGGCAGTGGAAAAATATGATTGTGGAGACGTGTTCCTCTTTCATTCCTCTTTTTTTTCATCTTGCTTTTATCAgagaaatgcatttaatttaattgtatattttttttacaaggcCATGAATCTTGTGTCATTAAGTCTGTTATAAGCAACATATAAAAAACAGTCATGCTGtgtttaataattacaataaatctGTGCTTAGTA

Function

symbol description
pkib Predicted to enable cAMP-dependent protein kinase inhibitor activity. Predicted to be involved in negative regulation of cAMP-dependent protein kinase activity. Predicted to act upstream of or within negative regulation of protein kinase activity. Predicted to be active in cytoplasm and nucleus. Orthologous to human PKIB (cAMP-dependent protein kinase inhibitor beta).

GO:

id name namespace
GO:2000480 negative regulation of cAMP-dependent protein kinase activity biological_process
GO:0006469 negative regulation of protein kinase activity biological_process
GO:0005634 nucleus cellular_component
GO:0005737 cytoplasm cellular_component
GO:0004860 protein kinase inhibitor activity molecular_function
GO:0004862 cAMP-dependent protein kinase inhibitor activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-041014-312 Predicted to enable cAMP-dependent protein kinase inhibitor activity. Predicted to be involved in negative regulation of cAMP-dependent protein kinase activity. Predicted to act upstream of or within negative regulation of protein kinase activity. Predicted to be active in cytoplasm and nucleus. Orthologous to human PKIB (cAMP-dependent protein kinase inhibitor beta).

Ensembl:

ensembl_id ENSDARG00000053110

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00036052 True 1409 mRNA 0.41 3 40371897 40451115

Neighbor

gene id symbol gene type direction distance location
XLOC_018313 fabp7b coding downstream 1161 40369257 ~ 40370736 (-)
XLOC_018312 smpdl3a coding downstream 4404 40337423 ~ 40367493 (-)
XLOC_018311 NA coding downstream 34998 40330106 ~ 40336899 (-)
XLOC_018310 clvs2 coding downstream 52007 40269891 ~ 40319890 (-)
XLOC_018309 NA coding downstream 117412 40215369 ~ 40254485 (-)
XLOC_018315 hsf2 coding upstream 24461 40475576 ~ 40487284 (-)
XLOC_018316 cx43 coding upstream 264048 40715163 ~ 40720530 (-)
XLOC_018317 cx32.2 coding upstream 273092 40724207 ~ 40729364 (-)
XLOC_018318 cx28.9 coding upstream 293639 40744754 ~ 40750953 (-)
XLOC_018319 cx32.3 coding upstream 302403 40753518 ~ 40755614 (-)
XLOC_017928 CU539064.1 misc downstream 30318196 10053405 ~ 10053701 (-)
XLOC_018308 CR847530.1 non-coding downstream 451723 39919232 ~ 39920174 (-)
XLOC_018305 NA non-coding downstream 625460 39744195 ~ 39746437 (-)
XLOC_018303 BX936317.1 non-coding downstream 685770 39601856 ~ 39686127 (-)
XLOC_018322 BX510919.2 non-coding upstream 776949 41228064 ~ 41228179 (-)
XLOC_018323 NA non-coding upstream 786589 41237704 ~ 41242669 (-)
XLOC_018324 BX510919.3 non-coding upstream 901731 41352846 ~ 41352960 (-)
XLOC_018325 NA non-coding upstream 1459455 41910570 ~ 42173191 (-)
XLOC_018328 NA non-coding upstream 1769619 42220734 ~ 42241456 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) G153127 NA non-coding CI01000029 null 2546075 ~ 2576115 (-)