XLOC_018313 (fabp7b)


Basic Information

Item Value
gene id XLOC_018313
gene name fabp7b
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007131.7
NCBI id CM002904.2
chromosome length 55201332
location 40369257 ~ 40370736 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00036051
AGCTACATTTTTACAAGGCATTGTACATTAAGTTTGTTTATCACAGTTTTGATTCAGAAAATGGTGGATGCTTTTTGTGGCACGTGGAAGCTGGTCAGCAGTGACAACTTTGATGAGTATATGAAATCCCTAGGTATTGGGTTTGCAACAAGACAAGTTGGAAATGTGACCAAACCGACGCTCGTCATCTCGAAGGAGGGAGAAAAGGTGGTCATAAAAACACAGAGTACCTTCAAGAACACCGAGATCTCATTCACACTGGGTGAAGAGTTTGAGGAAACCACTGCTGATGACCGACACTGCAAAtccACTGTGCTGCTCAAAGGAAACCAGCTCGTCCATGTGCAAAAGTGGGATGGGAAAGAGACCACTTTTATCCGAGAGATCAAGGACGGGAAGATGGTGATGAAACTCACCTTTGGGGACGTGGAGGCTCTTCGCACCTATGAAAAAGCATAGGCTTTGGGAATACTATCAGGTGTCGCTGTTCTTCTTTCTGGCCAGAAACAGACAGTCATGATGTGCTCTGAAAGCAAAACCTTGAACTTTATTCATCCAACTCATTGAAAGAATggactttaaatatttttgttttttaattattattatttttatttgtacaatAGCTACATATAGTCTGCTAGTTTGTATAATAAAGAACCAAAAGAAATTA

Function

symbol description
fabp7b Predicted to enable fatty acid binding activity. Is expressed in several structures, including eye; heart; integument; liver; and pleuroperitoneal region. Orthologous to human FABP7 (fatty acid binding protein 7).

GO:

id name namespace
GO:0005504 fatty acid binding molecular_function
GO:0008289 lipid binding molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-040614-4 Predicted to enable fatty acid binding activity. Is expressed in several structures, including eye; heart; integument; liver; and pleuroperitoneal region. Orthologous to human FABP7 (fatty acid binding protein 7).

Ensembl:

ensembl_id ENSDARG00000034650

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00036051 True 673 mRNA 0.40 4 40369257 40370736

Neighbor

gene id symbol gene type direction distance location
XLOC_018312 smpdl3a coding downstream 1764 40337423 ~ 40367493 (-)
XLOC_018311 NA coding downstream 32358 40330106 ~ 40336899 (-)
XLOC_018310 clvs2 coding downstream 49367 40269891 ~ 40319890 (-)
XLOC_018309 NA coding downstream 114772 40215369 ~ 40254485 (-)
XLOC_018307 nkain2 coding downstream 249385 39806370 ~ 40119872 (-)
XLOC_018314 pkib coding upstream 1161 40371897 ~ 40451115 (-)
XLOC_018315 hsf2 coding upstream 104840 40475576 ~ 40487284 (-)
XLOC_018316 cx43 coding upstream 344427 40715163 ~ 40720530 (-)
XLOC_018317 cx32.2 coding upstream 353471 40724207 ~ 40729364 (-)
XLOC_018318 cx28.9 coding upstream 374018 40744754 ~ 40750953 (-)
XLOC_017928 CU539064.1 misc downstream 30315556 10053405 ~ 10053701 (-)
XLOC_018308 CR847530.1 non-coding downstream 449083 39919232 ~ 39920174 (-)
XLOC_018305 NA non-coding downstream 622820 39744195 ~ 39746437 (-)
XLOC_018303 BX936317.1 non-coding downstream 683130 39601856 ~ 39686127 (-)
XLOC_018322 BX510919.2 non-coding upstream 857328 41228064 ~ 41228179 (-)
XLOC_018323 NA non-coding upstream 866968 41237704 ~ 41242669 (-)
XLOC_018324 BX510919.3 non-coding upstream 982110 41352846 ~ 41352960 (-)
XLOC_018325 NA non-coding upstream 1539834 41910570 ~ 42173191 (-)
XLOC_018328 NA non-coding upstream 1849998 42220734 ~ 42241456 (-)

Expression


Co-expression Network