RNA id: TCONS_00036051


Basic Information

Item Value
RNA id TCONS_00036051
length 673
RNA type mRNA
GC content 0.40
exon number 4
gene id XLOC_018313
representative True

Chromosome Information

Item Value
chromosome id NC_007131.7
NCBI id CM002904.2
chromosome length 55201332
location 40369257 ~ 40370736 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

AGCTACATTTTTACAAGGCATTGTACATTAAGTTTGTTTATCACAGTTTTGATTCAGAAAATGGTGGATGCTTTTTGTGGCACGTGGAAGCTGGTCAGCAGTGACAACTTTGATGAGTATATGAAATCCCTAGGTATTGGGTTTGCAACAAGACAAGTTGGAAATGTGACCAAACCGACGCTCGTCATCTCGAAGGAGGGAGAAAAGGTGGTCATAAAAACACAGAGTACCTTCAAGAACACCGAGATCTCATTCACACTGGGTGAAGAGTTTGAGGAAACCACTGCTGATGACCGACACTGCAAAtccACTGTGCTGCTCAAAGGAAACCAGCTCGTCCATGTGCAAAAGTGGGATGGGAAAGAGACCACTTTTATCCGAGAGATCAAGGACGGGAAGATGGTGATGAAACTCACCTTTGGGGACGTGGAGGCTCTTCGCACCTATGAAAAAGCATAGGCTTTGGGAATACTATCAGGTGTCGCTGTTCTTCTTTCTGGCCAGAAACAGACAGTCATGATGTGCTCTGAAAGCAAAACCTTGAACTTTATTCATCCAACTCATTGAAAGAATggactttaaatatttttgttttttaattattattatttttatttgtacaatAGCTACATATAGTCTGCTAGTTTGTATAATAAAGAACCAAAAGAAATTA

Function

GO:

id name namespace
GO:0005504 fatty acid binding molecular_function
GO:0008289 lipid binding molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-040614-4 Predicted to enable fatty acid binding activity. Is expressed in several structures, including eye; heart; integument; liver; and pleuroperitoneal region. Orthologous to human FABP7 (fatty acid binding protein 7).

Ensembl:

ensembl_id ENSDART00000041229

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00036491 lncRNA downstream 32358 40330106 ~ 40336899 (-) True XLOC_018311
TCONS_00036944 lncRNA downstream 114772 40215369 ~ 40254485 (-) True XLOC_018309
TCONS_00036943 lncRNA downstream 114777 40215369 ~ 40254480 (-) False XLOC_018309
TCONS_00036942 lncRNA downstream 350039 39893074 ~ 40019218 (-) False XLOC_018307
TCONS_00036055 lncRNA upstream 109193 40479929 ~ 40484965 (-) True XLOC_018315
TCONS_00036066 lncRNA upstream 386662 40757398 ~ 40758384 (-) True XLOC_018320
TCONS_00036945 lncRNA upstream 866968 41237704 ~ 41242669 (-) True XLOC_018323
TCONS_00036074 lncRNA upstream 1539834 41910570 ~ 41926435 (-) False XLOC_018325
TCONS_00036073 lncRNA upstream 1539834 41910570 ~ 41926474 (-) False XLOC_018325
TCONS_00036050 mRNA downstream 1764 40337423 ~ 40367493 (-) True XLOC_018312
TCONS_00036049 mRNA downstream 8686 40337423 ~ 40360571 (-) False XLOC_018312
TCONS_00036048 mRNA downstream 49367 40269891 ~ 40319890 (-) True XLOC_018310
TCONS_00036045 mRNA downstream 249385 39806370 ~ 40119872 (-) False XLOC_018307
TCONS_00036046 mRNA downstream 250167 39893074 ~ 40119090 (-) True XLOC_018307
TCONS_00036052 mRNA upstream 1161 40371897 ~ 40451115 (-) True XLOC_018314
TCONS_00036053 mRNA upstream 104840 40475576 ~ 40487208 (-) False XLOC_018315
TCONS_00036054 mRNA upstream 104840 40475576 ~ 40487284 (-) False XLOC_018315
TCONS_00036056 mRNA upstream 344427 40715163 ~ 40720521 (-) False XLOC_018316
TCONS_00036057 mRNA upstream 344427 40715163 ~ 40720530 (-) False XLOC_018316
TCONS_00036008 other downstream 1336321 39032821 ~ 39032936 (-) True XLOC_018289
TCONS_00036007 other downstream 1463644 38905531 ~ 38905613 (-) True XLOC_018288
TCONS_00035989 other downstream 1846608 38518697 ~ 38522649 (-) False XLOC_018280
TCONS_00035984 other downstream 2434942 37930687 ~ 37934315 (-) True XLOC_018273
TCONS_00035936 other downstream 4824063 35541282 ~ 35545194 (-) True XLOC_018246
TCONS_00036068 other upstream 391576 40762312 ~ 40766351 (-) False XLOC_018321
TCONS_00036069 other upstream 391596 40762332 ~ 40766350 (-) False XLOC_018321
TCONS_00036070 other upstream 391615 40762351 ~ 40766618 (-) True XLOC_018321
TCONS_00036071 other upstream 857328 41228064 ~ 41228179 (-) True XLOC_018322
TCONS_00036072 other upstream 982110 41352846 ~ 41352960 (-) True XLOC_018324

Expression Profile

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