XLOC_001967 (CT990561.1)


Basic Information

Item Value
gene id XLOC_001967
gene name CT990561.1
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007121.7
NCBI id CM002894.2
chromosome length 45420867
location 12517059 ~ 12730451 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00003845
CACCTTCATTAGTCTGGATGAGTCTGTGTCATGAGCAGTCACTGGTGTCTATTGGAGAGTGGTAATGgtctcctcctcctccccctcctcctcctcttcatgcTGTCGGCTGTGAGAGTCTGACAGCTCCGCGAGCCTCAAACCGATCACCGCACCGTGCTCGCCGCTTTTCCGCTCAGATGCGCTGTTTTCCCCGCGTCTCCCCATGTCTTCCGCGGCTCTGTCTGAATCCTCTCAGCGCTGATGTGACTGCAGTTCATCCGTTCATTTGACACGTTTCTTCAGTCGATGAGATGCGTTCACGGTGGACTTACGTCGCCTGGATTTGTGTCTTCAGTCTCGGCGCCTTCAGGACTTTCTGCATTCCCGCTAATGAAGTTAATCTACTGGACTCTCGCTCAGTAATGGGTGATTTGGGCTGGGTTGCCTACCCGAAGAACGGGtgggaaGAAATCGGAGAGGTGGATGAGAACTATGCACCAATTCACACATACCAAGTGTGCAAAGTGATGGAGCACAACCAGAACAACTGGTTGCAGACCAACTGGATATTAACCCAAGGTGCCCAGCGAGTGTTCCTGGAGCTCAAGTTCACCCTACGGGACTGCAACAGTCTCCCCGGAGGTCTGGGGACGTGCAAGGAGACTTTCAACGTGTACTATTACGAAACCAATGATGAGGAGAGAAGGAATATTCGGGAAAGCCAGTACTCAAAGATTGACACCATTGCCGCCGACGAGAGCTTTACGGAGCTTGATCTCGGAGACAGAGTCATGAAGCTAAACACGGAAGTTAGGGATCTGGGTCCACTGACCAAAAAAGGCTTCTACTTGGCTTTCCAAGACCTGGGCGCGTGTATCGCCCTCGTGTCCGTCCGTGTCTTCTACAAAAAGTGTCCTTTTGTTGTCAGGAATTTGGCCCTTTTCCCGGATACTATAACTGGGGCTGATTCCTCGCAGCTTCTGGAGGTGTCAGGGACCTGCGTCAACAACTCGGTGGCCGATGAACTTCCCAGGATGCATTGCAGTGCTGAGGGGGAGTGGCTGGTGCCCATTGGGAGGTGCATGTGCCAGGCGGGCCATGAGGAAGTTAATGGCTCCTGTCAAGTGTGTAAACCCGGGTTTTACCGGTCAGTTCTGGAGAGCAGGAGCTGCAGTAAATGTCCTCCCAGAAGCTTCAGCAAGGTTGAGGCATCCATCTCCTGTCAGTGTGAGCAAGGCTACTTCAGGACCCAGGCGGACCCTGCTAACATGGCCTGCACACGGCCTCCTTCTGCTCCACGTAATGCTATCTCCAACGTAAATGAAACCAGTGTGTTTTTGGAGTGGACTGCGCCTGAAGACACCGGTGGCCGGAAAGACGTGAGATACAACATCCTCTGCAGTAAAATCAGCACCGACTCGGGTCACTACGAGCCATGTGGAAGCCATGTGCGGTTTCTGCCTCAGCGTACGGGCTTGAGAAACACCTCGGTTATGGTCGTGGATCTCCTAGCTCACACCAACTACACGTTTGAAGTGGAGGCTATGAACGGTGTGTCAGATCTAACTGGCCCTCCGCGTCAGTATGTCTCGCTCAATGTCACCACCAACCAAGCAGCTCCGTCTCCTATAACCGTGGTGAAGAAAGGCAAGACGACGAAGAATAGCATCACGGTGTCCTGGCAAGAGCCCGATCGACCGAACGGCATCATCCTCGAGTATGAGATCAAATACTTTGAGAAGGATCAGGAAACAAGCTACACAATCATCAAGTCAAAGGAGACGGAGGTTTTAGTGGATGGCCTTAAACCTTCCTCTGCATACATCTTTCAAATCAGAGCACGCACCTCCGCCGGGTACGGAGGCTTTAGTCGCCGATTTGAGTTTGAAACCAGTCCTTACTTAGCAGCCTCAAGTGAGCAGGGTCAGGTGCCCATCATTGCTGTCGCCGTGACTGTGGGCATCATCCTCATTGCCTTGGTCACGGGTTTCCTCATGAGTGGCAGACGTTGTGGATACAGCAAAGCCAAGCAAGATCCAGATGAGGAGAAGATGCACTTCCACAATGGGCACATTAAATTCCCTTCAGTCCGCACGTATATCGATCCCCACACCTATGAAGATCCCAACCAGGCTGTACACGAGTTTGCCAAGGAGATTGATGTCTGTTGTATCACCATTGAGCGGGTTATTGGAGCTGGTGAATTCGGGGAGGTGTGCAGTGGTCTTCTGCGGCTGCCAGGGAAGAGAGAGATCCCAGTGGCCATTAAAACTCTGAAAGCCGGATACACGGAGAAGCAGAGGAGGGACTTCTTGGGTGAAGCCAGCATTATGGGACAGTTTGAGCATCCCAACATCATCCATCTGAAGGGGGTCATCACCAAAAGTAAACCGGTGATGATAATAACAGAATATATGGAGAATGGATCTCTGGACACCTTTCTGAAGAAGAATGACGGTCAGTTCACTGTGATCCAGTTGGTTGGCATGCTGCGTGGCATAGCATCAGGCATGCGCTACCTCTCCGAGATGGGATATGTGCACCGTGACCTCGCTGCCCGCAACATCCTGGTCAACAGCAACCTGGTGTGTAAGGTGTCTGACTTCGGCCTGTCCAGAGTGCTGGAGGATGACCCAGAGGCAGCTTACACCACTCGCGGAGGGAAGATTCCCATCAGATGGACGGCTCCAGAGGCCATCGCCTACAGGAAGTTCACCTCCGCCAGTGACGTGTGGAGCTACGGCATCGTCATGTGGGAAGTGATGTCGTATGGAGAAAGGCCCTACTGGGAGATGAGCAATCAAGATGTGATAAAGGCAGTGGAGGAGAACTACAGACTGCCGGGGCCCATGGACTGTCCGACCGCCCTCTATCACCTCATGATGGACTGCTGGCAGAAAGACAGGAACAGCCGGCCCAAATTTGAGGAGATTGTCAGCTTATTGGACAAGCTCATCCGCAATCCAAGCAGCCTGAAGGGTCTCGTTAACCCATCTAACAGAGTGTCTAATCTGTTAGTGGAGCAAGGCAGTCCAGAGGGCTGTGTGTTCAGATCAGTGGAGGAGTGGCTGGAGGCCATCAAAATGGGTCGATACACTGAGCTTTTCATGGAAAGTGGATACACTTCTCTACAAGTAGTCACTCAAATGACCTTGGAAGATCTTCGGCGGGTCGGAGTCACTTTGGCAGGCCATCAGAAGAAGATCCTCAACAGCATTCAGGAGATGCGGGTCCAGATGATGAACGCCACTATGCCCATCTGA

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000058284

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00003845 True 3245 mRNA 0.52 17 12517059 12730451

Neighbor

gene id symbol gene type direction distance location
XLOC_001966 CR388225.1 coding upstream 183690 12333253 ~ 12333369 (+)
XLOC_001965 NA coding upstream 587927 11928089 ~ 11929132 (+)
XLOC_001964 NA coding upstream 589073 11926073 ~ 11927986 (+)
XLOC_001962 ppwd1 coding upstream 728494 11767791 ~ 11788565 (+)
XLOC_001963 CR925713.2 coding upstream 742540 11774405 ~ 11774519 (+)
XLOC_001968 lpar1 coding downstream 269919 13000370 ~ 13064110 (+)
XLOC_001969 rassf6 coding downstream 479129 13209580 ~ 13236012 (+)
XLOC_001970 tmem267 coding downstream 548628 13279079 ~ 13287169 (+)
XLOC_001971 NA coding downstream 568273 13298724 ~ 13304277 (+)
XLOC_001972 BX957308.1 coding downstream 1126341 13856792 ~ 13894856 (+)
XLOC_001961 NA non-coding upstream 851096 11652594 ~ 11665963 (+)
XLOC_001973 BX000705.2 non-coding downstream 1200397 13930848 ~ 13931718 (+)
XLOC_001980 NA non-coding downstream 2305820 15036271 ~ 15042748 (+)
XLOC_001981 NA non-coding downstream 2316555 15047006 ~ 15048782 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location