XLOC_001972 (BX957308.1)


Basic Information

Item Value
gene id XLOC_001972
gene name BX957308.1
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007121.7
NCBI id CM002894.2
chromosome length 45420867
location 13856792 ~ 13894856 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00003853
tggttcgTTGGTGGGTTGGGTTGGATTGagtttggttggtttgttggttggttggtgagttggttggttggtgagTTAGTTGGTTGGCTGGTTCATATGTGGATTAGGATAGTTTTGGttgggttggttagttggttggtttgggtttggttgggttggttggttggcagGTTGGTCGGATGGCTTGGGTTAATTGaataattgattggttggttggttcgatggttacttggttggttggttggctcattgattcattgactgattgattggatAAGTTGGGTTGGGTTGATTGATATGGTTGGTTGTGTAGTTAATACCTGTCATAAACTCTCAAACTCTGCttgatttcatatttttatttcatatttaattatttgattcattttcattGCTGTTACAATAAAAAAGTATGCAAATGGTTAGGTTGGGTTGGGTTTGGTATGAAActctttttttgttaaattccatccatccatcccatctgcaatgttttgtgatttttgtcttacatttatttgcttgtttaataCATCTGGTtttacaataatatatttgtgcatatacattagattattctGTACCAATGCAAagtttagaatatatatatatatatatatatatatatatatatatatatatatatatatattatttattttttattttttttgtgctatTAAGTGACTATatagttttaatcatta

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000094468

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00003853 True 707 processed_transcript 0.32 3 13856792 13894856

Neighbor

gene id symbol gene type direction distance location
XLOC_001971 NA coding upstream 552515 13298724 ~ 13304277 (+)
XLOC_001970 tmem267 coding upstream 569623 13279079 ~ 13287169 (+)
XLOC_001969 rassf6 coding upstream 620780 13209580 ~ 13236012 (+)
XLOC_001968 lpar1 coding upstream 792682 13000370 ~ 13064110 (+)
XLOC_001967 CT990561.1 coding upstream 1126341 12517059 ~ 12730451 (+)
XLOC_001973 BX000705.2 coding downstream 35992 13930848 ~ 13931718 (+)
XLOC_001974 si:dkey-286h21.1 coding downstream 315811 14210667 ~ 14212801 (+)
XLOC_001975 sigmar1 coding downstream 593769 14488625 ~ 14494239 (+)
XLOC_001976 katnal2 coding downstream 604345 14499201 ~ 14521190 (+)
XLOC_001977 si:dkey-88l16.4 coding downstream 1052147 14947003 ~ 14949367 (+)
XLOC_001966 CR388225.1 non-coding upstream 1523423 12333253 ~ 12333369 (+)
XLOC_001965 NA non-coding upstream 1927660 11928089 ~ 11929132 (+)
XLOC_001964 NA non-coding upstream 1928806 11926073 ~ 11927986 (+)
XLOC_001963 CR925713.2 non-coding upstream 2082273 11774405 ~ 11774519 (+)
XLOC_001980 NA non-coding downstream 1141415 15036271 ~ 15042748 (+)
XLOC_001981 NA non-coding downstream 1152150 15047006 ~ 15048782 (+)
XLOC_001983 NA non-coding downstream 1193137 15087993 ~ 15088526 (+)
XLOC_001985 NA non-coding downstream 1201161 15096017 ~ 15096262 (+)

Expression


Co-expression Network