XLOC_001966 (CR388225.1)


Basic Information

Item Value
gene id XLOC_001966
gene name CR388225.1
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007121.7
NCBI id CM002894.2
chromosome length 45420867
location 12333253 ~ 12333369 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00003844
AGCcatagccatatcaccctgcagcccaagaccagttgcttactgaagctaagcagggctgagcctggtcggTGTCTGGATGGGAGAtaacatgggaaaactaggttttTGTTGGaa

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000113923

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00003844 True 117 rRNA 0.50 1 12333253 12333369

Neighbor

gene id symbol gene type direction distance location
XLOC_001965 NA coding upstream 404121 11928089 ~ 11929132 (+)
XLOC_001964 NA coding upstream 405267 11926073 ~ 11927986 (+)
XLOC_001962 ppwd1 coding upstream 544688 11767791 ~ 11788565 (+)
XLOC_001963 CR925713.2 coding upstream 558734 11774405 ~ 11774519 (+)
XLOC_001961 NA coding upstream 667290 11652594 ~ 11665963 (+)
XLOC_001967 CT990561.1 coding downstream 183690 12517059 ~ 12730451 (+)
XLOC_001968 lpar1 coding downstream 667001 13000370 ~ 13064110 (+)
XLOC_001969 rassf6 coding downstream 876211 13209580 ~ 13236012 (+)
XLOC_001970 tmem267 coding downstream 945710 13279079 ~ 13287169 (+)
XLOC_001971 NA coding downstream 965355 13298724 ~ 13304277 (+)
XLOC_001960 NA non-coding upstream 814514 11513386 ~ 11518739 (+)
XLOC_001972 BX957308.1 non-coding downstream 1523423 13856792 ~ 13894856 (+)
XLOC_001973 BX000705.2 non-coding downstream 1597479 13930848 ~ 13931718 (+)
XLOC_001980 NA non-coding downstream 2702902 15036271 ~ 15042748 (+)
XLOC_001981 NA non-coding downstream 2713637 15047006 ~ 15048782 (+)

Expression


Co-expression Network