Gene
RNA
| Item | Value |
|---|---|
| gene id | G71997 |
| gene name | plekhh2 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048565.1 |
| NCBI id | CM023219.2 |
| chromosome length | 95772356 |
| location | 65327593 ~ 65328512 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| symbol | description |
|---|---|
| plekhh2 | Predicted to be located in cytoskeleton. Orthologous to human PLEKHH2 (pleckstrin homology, MyTH4 and FERM domain containing H2). |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU79592 | True | 443 | lncRNA | 0.39 | 3 | 65327593 | 65328512 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110527082 | epcam | coding | upstream | 31489 | 65291708 ~ 65296104 (+) |
| LOC110527046 | LOC106576764 | coding | upstream | 105906 | 65173289 ~ 65221687 (+) |
| prop1 | LOC100192335 | coding | upstream | 159716 | 65161658 ~ 65167877 (+) |
| LOC110527013 | socs5 | coding | upstream | 206662 | 65068088 ~ 65120931 (+) |
| LOC110527002 | rhoq | coding | upstream | 285983 | 65021203 ~ 65041610 (+) |
| thada | LOC106576760 | coding | downstream | 43787 | 65372299 ~ 65476515 (+) |
| LOC110527092 | tisd | coding | downstream | 150421 | 65478933 ~ 65482225 (+) |
| LOC110527114 | LOC106576759 | coding | downstream | 351512 | 65680024 ~ 65697328 (+) |
| LOC110527123 | NA | coding | downstream | 466475 | 65794987 ~ 65799491 (+) |
| hcar1-3 | LOC106576755 | coding | downstream | 497835 | 65826347 ~ 65828743 (+) |
| G71935 | NA | non-coding | upstream | 71118 | 65194818 ~ 65256475 (+) |
| G71945 | NA | non-coding | upstream | 96190 | 65230164 ~ 65231403 (+) |
| G71826 | NA | non-coding | upstream | 290012 | 65004285 ~ 65037581 (+) |
| G71654 | NA | non-coding | upstream | 335689 | 64987228 ~ 64991904 (+) |
| G72047 | NA | non-coding | downstream | 77918 | 65406430 ~ 65444673 (+) |
| G72812 | NA | non-coding | downstream | 234601 | 65563113 ~ 65563455 (+) |
| G72866 | NA | non-coding | downstream | 328813 | 65657325 ~ 65662302 (+) |
| G72858 | LOC100136012 | non-coding | downstream | 358237 | 65686749 ~ 65735864 (+) |
| LOC110526969 | stk32c | other | upstream | 425969 | 64809255 ~ 64946164 (+) |
| G70011 | NA | other | upstream | 2052297 | 63274963 ~ 63275296 (+) |
| G67930 | mcmbp | other | upstream | 3594205 | 61729765 ~ 61733388 (+) |
| G67806 | LOC106581772 | other | upstream | 4012341 | 61314874 ~ 61315252 (+) |
| G66188 | NA | other | upstream | 5385529 | 59941486 ~ 59942064 (+) |
| LOC110527164 | LOC106576754 | other | downstream | 587223 | 65915581 ~ 65922285 (+) |
| G73515 | NA | other | downstream | 959167 | 66287679 ~ 66288469 (+) |
| LOC118965274 | LOC106576739 | other | downstream | 1091983 | 66417495 ~ 66424081 (+) |
| G74067 | LOC106576735 | other | downstream | 1427695 | 66756207 ~ 66758984 (+) |
| G74139 | NA | other | downstream | 1455823 | 66784335 ~ 66784969 (+) |
