G113048



Basic Information


Item Value
gene id G113048
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 10855649 ~ 10856221 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU129141
CCCTTATAAAGATGCATATCACATCCGTTAGCAATATTGTGTGTTCGTTGTATATAGTGGGAAGTCACATATCAGCCTACTACCATACACTTGTGGAATAATCTCCATAGGTCTCTCAAAAGTGGATGGTTTGGTGTCCAGGGGTAATTCAGACGGCTGGATGAGGTCCTTCAAAGTGGATGATTTGGTGTCCAGGGGTAATTCAGACGGCTGGATGAGGTCCTTCAAAGTGGATGATTTGGTGTCCAGGGGTAATTCAGACGGCTGGATGAGGTCCTTCAAAGTGGATGATTTGGTGTCCAGGGT

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU129141 True 306 lncRNA 0.51 3 10855649 10856221

Neighbor


gene id symbol gene type direction distance location
LOC110512108 rad21 coding downstream 29637 10811513 ~ 10826012 (-)
eif3h LOC100196680 coding downstream 47416 10736729 ~ 10808244 (-)
LOC118937678 NA coding downstream 93411 10759359 ~ 10762238 (-)
ccka cck-l coding downstream 137269 10715305 ~ 10718380 (-)
LOC110520767 ulk4 coding downstream 244202 10400640 ~ 10611447 (-)
LOC118937685 NA coding upstream 23635 10879856 ~ 10881390 (-)
LOC118937688 NA coding upstream 202763 11058263 ~ 11060049 (-)
lratd2b LOC106573048 coding upstream 308892 11165113 ~ 11168638 (-)
prelid3a LOC106593866 coding upstream 391816 11196145 ~ 11261793 (-)
LOC110514530 LOC106572903 coding upstream 541871 11398092 ~ 11402862 (-)
G112983 NA non-coding downstream 15885 10837642 ~ 10839764 (-)
G113038 NA non-coding downstream 22962 10832463 ~ 10832687 (-)
G113037 NA non-coding downstream 25001 10830410 ~ 10830648 (-)
G113036 NA non-coding downstream 26065 10829243 ~ 10829584 (-)
G113031 NA non-coding downstream 45837 10809587 ~ 10809812 (-)
G113057 NA non-coding upstream 17208 10873429 ~ 10875085 (-)
G113072 NA non-coding upstream 57843 10914064 ~ 10919182 (-)
G113074 NA non-coding upstream 63041 10919262 ~ 10921434 (-)
G113078 NA non-coding upstream 69608 10925829 ~ 10929349 (-)
G113079 NA non-coding upstream 84020 10940241 ~ 10941369 (-)
G112965 NA other downstream 136991 10648265 ~ 10718658 (-)
G112928 NA other downstream 284841 10570442 ~ 10570808 (-)
G112567 NA other downstream 508714 10346471 ~ 10346935 (-)
G112491 LOC106584755 other downstream 558650 10184147 ~ 10296999 (-)
G113096 NA other upstream 164820 11021041 ~ 11021734 (-)
G113688 NA other upstream 354252 11210473 ~ 11218154 (-)
G113712 NA other upstream 454622 11310843 ~ 11312658 (-)
G113720 NA other upstream 466820 11323041 ~ 11325612 (-)
G113733 LOC106606124 other upstream 493121 11349342 ~ 11352741 (-)

Expression



Co-expression Network