G113784


Basic Information

Item Value
gene id G113784
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 11480929 ~ 11482264 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU130317
ACATCTCTAAAGGTACCATACCACATCTCTAATGGTACCATACCACATCTCTAATGGTACCATACCACATCTCTAATACATCTCTAATGGTACCATACCACATCTCTAATGGTACCATACCACATCTCTAATACATCTCTAATGGTACCATACCACATCTCTAATACATCTCTAATGGTACCATACCACATCTCTAATGGTACCATACCACATCTCTAATACATCTCTAATGGTACCATACCACATCTCTAAAGGTACCATACCACATCTCTAATGGTACCATACCACATCTCTAATGGTACCATACCACATCTCTAATGGTACCATACCACATCTCTAATGGTACCATACCACATCTCTAATGGTACCATACCACATCTCTAATGGTACCATACCACATCTCTAATGGTACCATACCACATCTCTAATGGTACCATACCATGTCTCTAATACATCTCTAATGGTACCATACCACATC
>TU130319
ACATCTCTAAAGGTACCATACCACATCTCTAATGGTACCATACCACATCTCTAATGGTACCATACCACATCTCTAATACATCTCTAATGGTACCATACCACATCTCTAATGGTACCATACCACATCTCTAATACATCTCTAATGGTACCATACCACATCTCTAATGGTACCATACCACATCTCTAATGGTACCATACCACATCTCTAAAGGTACCATACCACATCTCTAATGGTACCATACCACATCTCTAATACATCTCTAATGGTACCATACCACATCTCTAATACATCTCTAATGGTACCATACCACATCTCTAATGGTACCATACCACATCTCTAATACATCTCTAATGGTACCATACCACATCTCTAAAGGTACCATACCACATCTCTAATGGTACCATACCACATCTCTAATGGTACCATACCACATCTCTAATGGTACCATACCACATCTCTAATGGTACCATACCACATCTCTAATGGTACCATACCACATCTCTAATGGTACCATACCACATCTCTAATGGTACCATACCACATCTCTAATGGTACCATACCATGTCTCTAATACATCTCTAATGGTACCATACCACATC
>TU130320
ACATCTCTAAAGGTACCATACCACATCTCTAATGGTACCATACCACATCTCTAATGGTACCATACCACATCTCTAATACATCTCTAATGGTACCATACCACATCTCTAATGGTACCATACCACATCTCTAATACATCTCTAATGGTACCATACCACATCTCTAATGGTACCATACCACATCTCTAATGGTACCATACCACATCTCTAATGGTACCATACCACATCTCTAATGGTACCATACCACATCTCTAATGGTACCATACCACATCTCTAATGGTACCATACCATGTCTCTAATACATCTCTAATGGTACCATACCACATC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU130317 False 478 lncRNA 0.49 2 11480929 11482264
TU130319 False 599 lncRNA 0.39 2 11480929 11482264
TU130320 True 324 lncRNA 0.34 2 11480929 11482264

Neighbor

gene id symbol gene type direction distance location
LOC110514530 LOC106572903 coding downstream 78067 11398092 ~ 11402862 (-)
prelid3a LOC106593866 coding downstream 219420 11196145 ~ 11261793 (-)
lratd2b LOC106573048 coding downstream 312291 11165113 ~ 11168638 (-)
LOC118937688 NA coding downstream 421456 11058263 ~ 11060049 (-)
LOC118937685 NA coding downstream 599539 10879856 ~ 10881390 (-)
LOC118937712 NA coding upstream 101944 11584208 ~ 11585455 (-)
LOC118937710 NA coding upstream 103295 11585559 ~ 11586577 (-)
LOC118937716 NA coding upstream 477015 11959279 ~ 11960863 (-)
LOC118937715 NA coding upstream 479290 11961554 ~ 11962594 (-)
LOC118937706 NA coding upstream 603300 12085564 ~ 12089429 (-)
G113771 LOC106596421 non-coding downstream 29364 11438751 ~ 11451565 (-)
G113770 NA non-coding downstream 45267 11434578 ~ 11435662 (-)
G113767 NA non-coding downstream 50867 11429701 ~ 11430062 (-)
G113762 NA non-coding downstream 58172 11421055 ~ 11422757 (-)
G113761 NA non-coding downstream 61412 11417910 ~ 11419517 (-)
G113786 NA non-coding upstream 3088 11485352 ~ 11485716 (-)
G113787 NA non-coding upstream 7151 11489415 ~ 11490964 (-)
G113789 NA non-coding upstream 10067 11492331 ~ 11492600 (-)
G113790 NA non-coding upstream 11272 11493536 ~ 11494031 (-)
G113794 NA non-coding upstream 19121 11501385 ~ 11501780 (-)
G113733 LOC106606124 other downstream 128188 11349342 ~ 11352741 (-)
G113720 NA other downstream 155317 11323041 ~ 11325612 (-)
G113712 NA other downstream 168271 11310843 ~ 11312658 (-)
G113688 NA other downstream 262775 11210473 ~ 11218154 (-)
G113096 NA other downstream 459195 11021041 ~ 11021734 (-)
LOC110513475 LOC106592216 other upstream 144271 11471939 ~ 12290710 (-)
G114390 NA other upstream 1101763 12584027 ~ 12585140 (-)
G114402 NA other upstream 1128405 12610669 ~ 12613680 (-)
G114424 NA other upstream 1225563 12707827 ~ 12709315 (-)
G114442 NA other upstream 1253050 12735314 ~ 12739157 (-)

Expression


Co-expression Network