G115639


Basic Information

Item Value
gene id G115639
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 14470822 ~ 14471376 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU132864
TATCTCTAGACTATAGAGGATCTGTTGTAGGTGATTATCTCTAGACTAGAGAGGATCTGTTGTAGGTGCTTATCTCTAGACTAGAGAGGATCTGTTGTAGGTGATTATCTCTACACTAGAGAGGATCTGTTGTAGGTGATTATCTCTAGACTAGAGAGGATATGTTGTAGGTGATTATCTCTAGACTAGAGAGGATATGTTGTTTGTTGTAACATGGACAATAAAGATGGATTACCAGCTATAGACTCACCCCTCCAGGCGGACATCAGGCAGGGTTCTGTTGAATGCGATCATCTCCGAGGCCATCAGGTTAAACTGGTTGATCTTAAACATCTCCTTCATCTTCTCCTGGTTCTCTTTAGAAATCACCACAGGTTTACCTCCTTCTCCTGGACCCTCCCTGGGACGcaatactgtat

Function

NR:

description
polypeptide N-acetylgalactosaminyltransferase 1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU132864 True 419 lncRNA 0.43 2 14470822 14471376

Neighbor

gene id symbol gene type direction distance location
LOC110535605 LOC106574865 coding downstream 52658 14408991 ~ 14418164 (-)
LOC110516895 LOC106574265 coding downstream 64012 14404395 ~ 14406810 (-)
LOC110490504 LOC106574261 coding downstream 65778 14398357 ~ 14405044 (-)
LOC110490494 LOC106586326 coding downstream 72573 14386733 ~ 14398249 (-)
LOC110490474 LOC106606103 coding downstream 95899 14365729 ~ 14374923 (-)
tmem245 LOC106595499 coding upstream 36740 14508116 ~ 14526558 (-)
LOC110508190 LOC106606061 coding upstream 56685 14528061 ~ 14533240 (-)
alg2 alg2 coding upstream 79309 14550685 ~ 14556207 (-)
LOC110535698 LOC106593159 coding upstream 302937 14774313 ~ 14795026 (-)
trnat-cgu NA coding upstream 363023 14834399 ~ 14834471 (-)
G115627 NA non-coding downstream 22881 14447631 ~ 14447941 (-)
G115612 NA non-coding downstream 49789 14420784 ~ 14421033 (-)
G115590 NA non-coding downstream 90322 14380289 ~ 14380500 (-)
G115645 LOC107593713 non-coding upstream 12883 14484259 ~ 14485230 (-)
G115610 NA non-coding upstream 30457 14501833 ~ 14502137 (-)
G115655 NA non-coding upstream 30993 14502369 ~ 14502570 (-)
G115656 NA non-coding upstream 31955 14503331 ~ 14503531 (-)
G115659 NA non-coding upstream 34529 14505905 ~ 14506562 (-)
G115492 NA other downstream 245903 14126196 ~ 14224919 (-)
LOC110535427 LOC106585544 other downstream 409864 14046340 ~ 14080800 (-)
G115431 LOC106574784 other downstream 494261 13962185 ~ 13976561 (-)
LOC118937748 LOC106574107 other downstream 809231 13650726 ~ 13661631 (-)
G115601 sc61b other upstream 92427 14556423 ~ 14565399 (-)
G116014 NA other upstream 343903 14815279 ~ 14816661 (-)
rbm12ba LOC106605943 other upstream 398336 14867830 ~ 14870776 (-)

Expression


Co-expression Network