XLOC_002130 (CR847844.2)


Basic Information

Item Value
gene id XLOC_002130
gene name CR847844.2
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007121.7
NCBI id CM002894.2
chromosome length 45420867
location 23553533 ~ 23559544 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00004124
GAGGAAAGCTGAACTGTCAACCTACTTAgacataaaaataaactgaacaaaacaaacaaacaaacaaaaacatattaaccATATAACTGGACTTCTACACACTGCAAATACAATAAGCAAAGacttgcaagaaaaaaaaacaaggaacagAATGTGAGAGCAGAACCGTTTTCTTCGAATATCTGCTATGATCATGAGGCATCTGTTATTAGTCCTATTTGCTGCACTAAAACAGGATATGATGATCTTGACTAATGGAATGGATTGAAAAAGTAAAACCTTAAAAGTGGAAGCGCAGAGCAGCACAGTCAACTCtagaaaaaacattaataatctcAAATTTAACATCAGCAAACTCAAAATGTCTTATTACGGCAATATGGATATTCACGAAACACACAAAATGAAgagagaggaggaagaggagatggAAATTTATGCTAACGCAGATCCAAACAACAGTTCTGATGTTTGGACAGAAACGGACAACTCGGTTACCAGATGCAAGAAACTCCAACACACAGGAAGTTATTCTGTGAGGATCAAAAACTCCAGAGCAGCTCCAGTGTGTTTGGTGCTACTGTGTTTTCTTCTGCTAACTGTAGTCATGGTGTTAAGTGTCATCATCTATACAAACAACAAAAACTACACTGAAGAGAGACACCAGCTACTAACAAACATCACCAACCTCACAGAAGACAGAGACACACTGCTAACTAAGGTCACCAACCTCACAGAAGACCAAAATCAGCTACATGCCAAGAACATAAGACTTACTCAAGAGAAAGATGAATTATCGTCCAATGAACAAGACCTGATTAAACAAAGAGACCACCTAAATCAACTGTTAAAAATGGAATGGATTTACTACCGTTCCAATCTTTACTACTTTTTCAAGTTGAAAAAAAGCTGGACTGAGAGCAGAAGATACTGTAGAAACCATGGAGCAGATCTGGTCATCATAAACAATAGAGAAGAGCAAgattttgtTGATAAAATAACTGCTGGTGAGAAAGCCTGGATTGGTCTGTCTGACAGTGATGTGGAGGGCAGTTGGAAATGGGTTGATGACAGCAAACCAACCTCTTGGATCTGGCATCATGGAGAACCTAGTAGTGGTGGAGGACAAGTGGAAGAAGACTGTGTTTTAACTGTTACATCAGCATGGGCTGATTACCCATGCGATGCTGAATTCCAATGGATCTGTGAGAAGAGAGTTTTTAAATAAccattttcatatttattgtcacctcttttttgctatttttgtttaCTCTGTTGGAAAAACCTCTCGTTAAAACCATCTGATGCTGAAATCTTAATCCATGTATTAATCATGTCACATCTGGATTACTGCAATACTATTGTTTTGGTCTGCCTAAAAAAAACGAATTGCCAGGATGAAGTGTTTAAAACTCAGCAGCAAGAGTTCTCATTTCTGCTCACATTACTCCTCTACAAGCATCACTGGATACCTGTGCCATTGCATAAACCGTTGAAAATATTACTCATATTTAAATCATTAACTGTGCTTTCACATCTTTCTGGCCTACTGTACCTTTACTCTCCTGGCTCTAAGCTCAGATCATCTGAGCTTGATCTTTTGGCTGTTCCTCTTTGTCAGCTGTCCACTTTAGGTGGAAGGTTTGGTGTCAATGCTCACAAGTTATGAAATGTACTGCCTCTTACACTTAGAAATATTAGATTTGTCtacttttaatgtatatttttaatttgtattttgtataATGTAGCTTCACCGGCCATATATGTATGTTGTCCATGTGAATGTGCAATTTGTTAAGTGATCTTAAGCAATGGGCACTACAGTGTGTAAATAAAACACGAGCTGTTGGTTTTTGTGATGGAATAAATGAATATGCACTGGACTTTCAGTAATCTAGCTCAATCGATTATAGTAAACTGTCATGTCATTATAAAATCACCTTGTTTTAAGATCTGTTTTCCataaaatcaatgatcttcactgcctgattgaaaTACtttataaagtgggtctcagactggacaagaagcactgcattaaactccATATGTGAGTGCAGGAGTTTCAGTGCTCTCCTGTTGCTACTGACTGTGCTTTTGTCAtgttttacagcatcaatgctcTAAAAGAAACATTATGATATTGAAAATATTCACATCAACCCttaaccggaagtttatcagtggcTTAAAAACACTTGTCGGGCATATATATAGGCTGAAAATAGAGCTGCATAGTTAACAGGTACTAAAATAGCATTACACTAAAGCACTAAAATACCGGTGATGCCATTGTTTTTGAAATGGCAGAATCATGGATGCAGGCATACAATAGTCAAGCTGTATGTTTGACAGTTAGGCCACTtgacaatgtttatttaaatacttcCATCTgcaagacattaaaaaaagagcCTTTCTGAGTGCTCTCTGTTATAAATGTATGTTTACATCATATATGGTactgattgtttttaaatgttttcaattcTTCTTACGTTGCAAATCTGGTGGTCGCATTGCAGAAGTTTTAACAAGTTGTCTTAAGTTTCATGGAAGAGCTCTGAAATTATAAAAGGAGAACTGATGACTGGAAGAAAGGAGGACCAGACCAACGACACTTTATGTTGTGCTTTCGTTTCTGTGTATACAGAAGTTGTCTGTGAGAGTAACTGTTTTGTGTTGATTTtacaattaaattgtatttaatgctTGGGGGT

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000102680

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00004124 True 2726 mRNA 0.37 5 23553533 23559544

Neighbor

gene id symbol gene type direction distance location
XLOC_002129 zmp:0000001103 coding upstream 2577 23548674 ~ 23550956 (+)
XLOC_002128 NA coding upstream 9467 23542617 ~ 23544066 (+)
XLOC_002127 CR847844.1 coding upstream 11645 23537576 ~ 23541888 (+)
XLOC_002126 zmp:0000000937 coding upstream 30218 23520952 ~ 23523315 (+)
XLOC_002125 zmp:0000000924 coding upstream 33635 23511816 ~ 23519898 (+)
XLOC_002131 NA coding downstream 29131 23588675 ~ 23591058 (+)
XLOC_002132 NA coding downstream 423763 23983307 ~ 23992917 (+)
XLOC_002133 gbe1a coding downstream 489119 24048663 ~ 24298042 (+)
XLOC_002134 NA coding downstream 536695 24096239 ~ 24096470 (+)
XLOC_002135 NA coding downstream 537511 24097055 ~ 24097310 (+)
XLOC_002122 CT827808.1 non-coding upstream 135586 23417833 ~ 23417947 (+)
XLOC_002119 NA non-coding upstream 514243 23034329 ~ 23039290 (+)
XLOC_002117 NA non-coding upstream 588107 22960289 ~ 22965426 (+)
XLOC_002116 FP102052.2 non-coding upstream 597163 22938231 ~ 22956370 (+)
XLOC_002136 NA non-coding downstream 757309 24316853 ~ 24375160 (+)

Expression


Co-expression Network