XLOC_021572 (nol4lb)


Basic Information

Item Value
gene id XLOC_021572
gene name nol4lb
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007134.7
NCBI id CM002907.2
chromosome length 46223584
location 17220986 ~ 17346255 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00042830
GCTGGAGAGGCTCTCGCGACCGCGCACAGATATTGTAGCGATATTAAACGGATAGAGAGAGTGGAGAGGAGAGGGGCTCTGCAACGAGGGGAGACCCTAGAAGAATATTAACAGCACACCCGCGAAGgaTGAGTGTTCAGTGAGTAGCGAGGAGTTTGATATGAGTGACCCCACATGGATATCAGCTGAACGTCACGGCACTCTGTCTGACCTGAATCACCCCTCCAGCGCGGATAGGATGCACAGCCCGCAAAACGCACACAAGGAAGAGGACGATGACTCATCTTCTGAAAGTGGTAGTGGCAATGGCATTCGTACACTGACTCCTCCTTCGGTCGGCGCGGCTGGTGTGAATGACAGTACAGGACCAGGATCGGGCTCATACGCAGAGGTTAACGGAAACAGCACCGCAGCACCACTCGACTTCAGCACCACTTCCTCATCCTCATCCTCAGAGGACCAGCAACCCGTCAACCTCAGTGACAGACTGAGTCAGGCTCTGCCCACTGCTGCCGCCATGCTGGCAACCTTTACCCCCGAACACACAGAGGAGCTGCGCAGAAAATACCCCAAATCCACAGAGCTGCGCCTTGACAGAGACATCAGGGACTACAACAACAAGtctCCTCAATACAGCTCAGGCAGCTATGATTCGATAAAGATGGAGATATGTGCTGAGGATCTGACTGTCGGTCGCTCTCAGGCGgcagatgatgatgacgatgaccATGATGACCACGACGATAGCGATAAGATCAATGATGTCGAAGGAGTGGATCCAGAGCGGTTGAAGGCCTTCAATATGTTTGTACGTCTCTTTGTGGATGAGAATCTGGACCGGATGGTGCCAATCTCTAAACAGCCTAAAGAGAAGATCCAGGCCATTATAGAGTCCTGCAGCCGTCAGTTCCCGGAGTTTCAGGAGCGCGCTCGCAAACGCATCCGCACCTACCTCAAATCCTGCCGCCGCATGAAGAAAAACGGCATGGAGACTCGACCCACACCTCCCCACCTGACCTCAGCTATGGCTGAAAACATCCTAGCAGCCGCCTGCGAGAGCGAATCACGCAAAGCTGCCAAAAGAATGCGCATGGATGTCTACCAGGCACACGAGGAGCCGGTATCTTTGGATAAGGCGGTCTCTCGTGAGCCGGTCTCACTGACCCACTCCGCTTACTCTCTCGCAGCCTCAGCCTACAGCCAGGACCAGCTCTATATTAATGGAGGCCTGAACTACAGCTACCGCGGTTATGGAGGACTGTGTGCCAGCATGCAGCACCCGGTGACTCTGAACACAGCTACTGCACAGACCAACGGGCCTACTGATCTCAGCATGAAATCTCTGGCCTCGAACTCATCCTCGTCCAGCTCCAGCAGTCTGGGCAGGAATGGGGGCGGAGCCTCAACTCAGCTCAGCCATACAGAAGTGGCGGCGGTGCGTCAGCTGATCGCAGGATACCGCGAGTCTGCGGCCTTCCTGCTGCGATCGGCAGATGAGCTGGAAAACCTCATACTGCAACAGAACTGAACCCGTCTGCAgcactctcgctctctctctcgacTACACACAACTgacccatcatcatcatcatcattctctCTGAGGAAAAGCATCTGGCTCTTAAAGAGAAAACACGCAGCTTCTGCTTTCATGGCTTCAGCGTGGAAAGGAACCTCTGAAGGACACTGCAGTGCTAAAGCTCCTGCCTTTCAAGCCTTCTCCACGTCCCTCCGAGAGCCATCGATTCCTCATGTTCTTTGTTTTTAGCTACTTCAAAGGAGGCCAATCCTCCTGACAGCACTAACTCCATGAAGACACTTTTGATTTGGAGGCGTAATGGAAagaaacaaa

Function

symbol description
nol4lb Is expressed in several structures, including gut; mesenchyme; nervous system; pronephros; and spinal cord neural tube. Orthologous to human NOL4L (nucleolar protein 4 like).

GO:

id name namespace
GO:0008150 biological_process biological_process

KEGG: NA

ZFIN:

id description
ZDB-GENE-070112-1702 Is expressed in several structures, including gut; mesenchyme; nervous system; pronephros; and spinal cord neural tube. Orthologous to human NOL4L (nucleolar protein 4 like).

Ensembl:

ensembl_id ENSDARG00000037607

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00042830 True 1852 mRNA 0.54 8 17220986 17346255

Neighbor

gene id symbol gene type direction distance location
XLOC_021571 BX927275.1 coding upstream 9180 17146315 ~ 17211806 (+)
XLOC_021570 commd7 coding upstream 106894 17102960 ~ 17114092 (+)
XLOC_021569 si:dkey-147f3.4 coding upstream 267750 16948049 ~ 16953236 (+)
XLOC_021568 si:dkey-147f3.8 coding upstream 275545 16928506 ~ 16945441 (+)
XLOC_021567 si:dkey-147f3.8 coding upstream 302795 16889152 ~ 16918191 (+)
XLOC_021574 SRMS coding downstream 7899 17354154 ~ 17385249 (+)
XLOC_021575 ptk6b coding downstream 41070 17387325 ~ 17404011 (+)
XLOC_021576 NA coding downstream 66270 17412525 ~ 17447163 (+)
XLOC_021577 BX649300.3 coding downstream 91299 17437554 ~ 17465232 (+)
XLOC_021578 NA coding downstream 126864 17473119 ~ 17477448 (+)
XLOC_021565 AL732515.2 non-coding upstream 361953 16858917 ~ 16859033 (+)
XLOC_021561 NA non-coding upstream 422264 16798100 ~ 16798722 (+)
XLOC_021556 CU041345.1 non-coding upstream 774946 16444961 ~ 16446040 (+)
XLOC_021554 NA non-coding upstream 813560 16406558 ~ 16407426 (+)
XLOC_021579 BX649300.4 non-coding downstream 155059 17501314 ~ 17501428 (+)
XLOC_021581 CR407550.1 non-coding downstream 310581 17656836 ~ 17659102 (+)
XLOC_021582 NA non-coding downstream 424169 17770424 ~ 17776345 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000001_04624476_04679572 NOL4LB coding CI01000001 null 4624476 ~ 4679829 (+)