CI01000001_04624476_04679572 (NOL4LB)


Basic Information

Item Value
gene id CI01000001_04624476_04679572
gene name NOL4LB
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000001
NCBI id null
chromosome length 13537560
location 4624476 ~ 4679829 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000001_04624476_04679572.mRNA
GATGAGTGTTCAGTGAGTAGTGAGGAGTTTGATATGAGTGACCCCACATGGATATCAGCTGAACGTCACACCACACTGTCTGACCTGAACCACCCCTCCAGCGCAGATAGGATGCACAGCCCACAAAACACACACAAGGAAGAGGACGTGTCGGTTTTGACGCTGTGGCTCCCACTGGCTGTGGCCTTGGTGCCGTGCCCTTCTCTCTGTGCAAAAGCCAGAGGCCAGGCAGGAGAAAGAGAAGAGAGTGGGGGGATGGTTCAAGTGAATATTGGGAGCTGCGTGATGGAGAAAATTTACTTAACACCTCAGTATGAGGGGCAAACACACGTAGTGCTAAAAATGTTGGTCAGTGCTTCAGATAATGAAGCTCAGAGCAATGGAGCAATGTTCTCTGAACAAATGCTGTCAAGACAGCAGACGTCTCTGATCTGCTCTGAACTCTCTCAGCGTTTACAGACAAACAGCTTAAAGATGCCCAACAACAACATCAGCAGCAGCAGCAGCAGCTTGCTGCGTAACCCTTCCCACTTGTCTCTCTTGCCCTCATACCGTCTGCTCTCTCACTCTCTCTATCCATTTTTCCTCTTCATTCTGGCCCAATGCCAGGACGTGCACCTGCATTCAGAGATGAACGAAAGTGTCATGATTATAACAGCCGTTGACACCATTGCAGTTTTAGTGTTGCCCGCCGCAAAGAACAGACTGACATCCACATGTAGCTTTGGACGACTGACAACAGAACAGACAAACAATGATTCATCTTCAGAAAGTGGGAGTGGCAATGGGATTCACACGCTGACTCCTCCCTCAGTAGGTGCGGCCGGTGTGAGCGACAGTACAGGGACAGGACCTGGATTGGGCTCGTACACCGAGGTTAACGGCAACGGTACCGCGGCTCCACTCGACTTCAGCACGACTTCCTCGTCCTCATCCTTAGAGGACCAGCAACCAGCCAACCTCAGCGACAGACTGAGCCAGGCCCTGCCCAGTGCTGCCGCCATGCTGGCGACCTTTAACCCCGAGCAAGCAGAAGAGCTGCGCAGAAAATACCCCAAATCCTCAGAGCTACGCCTTGACCGAGACATCAGGGACTATAACAACAAGATGTTTGTGCGTCTCTTTGTGGATGAGAACCTGGACCGTATGGTGCCAATCTCTAAACAGCCTAAAGAGAAGATCCAGGCCATTATTGAATCCTGCAGCCGTCAGTTCCCAGAGTTCCAGGAGCGTGCTCGCAAACGCATCCGCACCTACCTCAAATCCTGCCGCCGCATGAAGAAAAATGGCATGGAGACTCGACCCACGCCACCCCACCTGACCTCAGCCATGGCTGAAAACATTCTAGCAGCTGCCTGTGAGAGCGAATCACGCAAAGCTGCCAAAAGAATGCGCATGGATGTCTACCAGGCGCACGAGGACCCAGTATCTCTGGAAAAGGCGGTCTCTCGTGAGCCGGTTTCACTGACCCACTCTGCATACTCCCTTGCTGCATCAGCCTACTCCCAGGACCAGCTATACATCAATGGAGGCCTCAACTACAGTTACCGAGGTTACGGTGGACTGTGCGCCAGCATGCAACACCCTGTGTCCCTGACAACAGCTACCGCCCAGACCAATGGGCCTACTGATCTCAGTATGAAGTCTCTGGCATCGAATTCGTCCTCGTCAAGCTCCAGTAGTCTCGGCAGGAATGGAGGAGGGGGCGGGGCTTCAGCTCAGCTCAGCCATACAGAGGTTGCAGCGGTGCGTCAGCTGATCGCGGGATACCGTTTTCCGGTCACCAAGGAAAACCATCTGGCTCTTAAAAATGTTAGAAGAGAGAGAAAACACAGCTTCATCAAGCTTTTGCTTTCATGTCGCTTCAGTGAGAATGACCGACAGATGAAGAGGATAAACATGGAGATGAATCTCTGAAGGACACTGCAGTGCTGAAGCGGACGGTTCGATGTATCCTCCGCGTTCTGCTCCTGCATTTCATGCCTTCTCCACAGCCTCCCTCCGTTCGTTCTGCCTCCATGCCCCTCTGAGAGCCATTGATTTCCGATTTTCTTTGTTTTTAGCTACTTCAAAGGAGGAATTACGGCGCGCCAATCCTCCAGACAGCACTAACTAAATGAAGACACTTTTGATTTGGAGGTGTAATGGAAAGAAAGAAGAGAAAAAGAGCAAGA

Function

symbol description
nol4lb Is expressed in several structures, including gut; mesenchyme; nervous system; pronephros; and spinal cord neural tube. Orthologous to human NOL4L (nucleolar protein 4 like).

GO:

id name namespace
GO:0005575 cellular_component cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000001_04624476_04679572.mRNA True 2174 mRNA 0.52 11 4624476 4679829

Neighbor

gene id symbol gene type direction distance location
CI01000001_04586080_04595939 NA coding upstream 28058 4585896 ~ 4596418 (+)
CI01000001_04567822_04568927 NA coding upstream 55216 4567464 ~ 4569260 (+)
CI01000001_04543164_04553053 COMMD7 coding upstream 70803 4542618 ~ 4553673 (+)
CI01000001_04462781_04463560 NA coding upstream 159863 4462781 ~ 4464613 (+)
CI01000001_04433559_04437385 NA coding upstream 187026 4433559 ~ 4437450 (+)
CI01000001_04688934_04700615 HCK, SRMS coding downstream 9105 4688934 ~ 4700704 (+)
CI01000001_04701645_04713999 NA coding downstream 21816 4701645 ~ 4714153 (+)
CI01000001_04723418_04724292 NA coding downstream 43589 4723354 ~ 4725671 (+)
CI01000001_04773238_04776581 MGC83062, GID8, GID8.L, CT011, GID8A, GID8B coding downstream 92872 4772701 ~ 4777329 (+)
CI01000001_04779079_04792659 SLC17A9B, SLC17A9 coding downstream 99108 4778937 ~ 4792827 (+)
G15404 NA non-coding upstream 57934 4566270 ~ 4566542 (+)
G15371 NA non-coding upstream 133095 4486920 ~ 4491381 (+)
G15370 NA non-coding upstream 137677 4481838 ~ 4486799 (+)
CI01000001_04422037_04431229 NA non-coding upstream 191874 4422037 ~ 4432602 (+)
G15360 NA non-coding upstream 267860 4356216 ~ 4356616 (+)
G15395 NA non-coding downstream 73888 4753717 ~ 4758419 (+)
G15416 NA non-coding downstream 117647 4797476 ~ 4797794 (+)
G15419 NA non-coding downstream 121144 4800973 ~ 4801530 (+)
G15789 NA non-coding downstream 255542 4935371 ~ 4935990 (+)
CI01000001_03618075_03620436 NA other upstream 1003025 3618075 ~ 3621451 (+)
CI01000001_01668334_01670035 CAMK2N1B other upstream 2953472 1667762 ~ 1671167 (+)
G13051 NA other upstream 3579324 1043713 ~ 1045152 (+)
CI01000001_00483853_00488761 VWA1 other upstream 4132419 483853 ~ 488825 (+)
G12614 NA other upstream 4313535 309144 ~ 310941 (+)
G15794 NA other downstream 381389 5061218 ~ 5064704 (+)
CI01000001_05279884_05287123 NA other downstream 606920 5279837 ~ 5287698 (+)
G15995 NA other downstream 1032056 5711885 ~ 5714951 (+)
CI01000001_07531945_07539781 NA other downstream 2852743 7531541 ~ 7540586 (+)
G17234 NA other downstream 3352295 8032124 ~ 8032483 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_021572 nol4lb coding NC_007134.7 CM002907.2 17220986 ~ 17346255 (+)