CI01000001_04701645_04713999


Basic Information

Item Value
gene id CI01000001_04701645_04713999
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000001
NCBI id null
chromosome length 13537560
location 4701645 ~ 4714153 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000001_04701645_04713999.mRNA
ACATTGTGGGACAAAATATTCGGACCCTCAAAGGGCGATGGAGAAAACAGCGTGAAATCTGACTGCACGGGTGAAGAACCCGGTAATACAAGTCGTTACGATCCGCAGCCGCAGCCACCGCCACCATCACCTCGACCTCCGAAGCCAGAGGAGAATGGTGCTGATATTTATACTGCTCTATGGGACTTTGAGGCACGCGACGAAAAGGAGTTGTCGTTCAAAGCTGGTGATATGTTCGAGATTACCAACCGTTCCGGTGACTGGTGGAGTGCGAAGAAACTCGACTCATTCGGCCGCGGGGAAACCGGTTTTGTTCCGTTCAATTATGTGGCGCGAGCGGAATCTATACAGTCTCAACCGTGGTTTTTTGGAAAGATGAGTCGTTTTGAAGCAATGAGTCTCCTCATGTTACCAGGAAATGATAATGGATCCTTCCTTGTGCGAATTAGTGAGAGTGACAGCATGGGCTTCGTGATCTCAGTGAAGACACAGAACAAAGCAAAACACTTCAAGATCTACCAGACTAGTGGTCAGGTCTATGTGGATCCGTCTCCTACATTCGCCAGTGTATTAGAGGTGGTTGAATATTATCAAACTCACCCATTATCCACTTCAGACAAACTGAAGCGACCCTGTATTCGGAATAAGCCTCAGCTGCAGGGTCTGTCACCCTCCACAGACGATGAGTGGGAACTGCCTAAAGAAGAATTTACCCTTGGAACGAAGCTGGGTGGTGGCCACTTTGCTGACGTTTACAGTGGCACGTGGAGAAATCAGACTAAAGTGGCCATCAAAATCCTCAAGAAAACTGATGCTGTGGTGCAGAGGGAATTTCATTTGGAGGTGCAGATCATGAAGCGTCTGCGTCACAGGCACCTGATTGCACTCTTTGCCATCTGCACTTCTTCCACCCCATTTTACATCATCACAGAACTAGTAGAGAAGGGCGACCTGCTTAATTTCCTCAGAATGGGAGAGGGTAAGGCTTTGGAAATGGAGTCTCTGATTGACATGGCAGCTCAAGTAGCAGATGGGATGGCATATTTAGAGGCAAATCACAGTATTCATAGAGACCTTGCTGCAAGAAATGTTCTAGTCGGAGAGGGCTATGTCTGCAAAATTGCTGATTTTGGCCTAGCTCGAGTCATTAAGGAGCCTGTTTATATATCTGATGACAAGAAAATACCATATAAATGGACCGCACCTGAGGCTATCAGTCATGGCCGTTTCTCAAGTAAATCTGATGTCTGGTCATTTGGGATTCTCCTTTATGAGATTGTCACGCATGGAGGCATGCCTTACCCAGGTTATCAGCCTGGTGAGGTGTATAGTCTCGTCGCAGAAAGACACTATAGAATGCCTTCACCACCCGGTTGTCCACAGATCATTTACAACATCATGAAATCTTGCTGGAGAGCAGATCCAGGAGACCGTCCCACTTTTGAGGTTCTGAGACATGAACTAGACATCTATCAAGTGAGCCTCTATGAAGATTTGGGCAAAAAGCCTGAGCCGTTAAATTCTTGGATACCAAAACGAGACTGACTGTTAACAATTGCAACAGACAGATGCTACGTAAAATCATCTTTGAATCATCTTTGATGGATTAGATGGACTGTAGTAATTAGTCCACCATATCAGATTTCAGATCATGAGGAAGATGCACACATGAAGCACTTTTTGGGAGCACTAAGGGCAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000001_04701645_04713999.mRNA True 1699 mRNA 0.46 8 4701645 4714153

Neighbor

gene id symbol gene type direction distance location
CI01000001_04688934_04700615 HCK, SRMS coding upstream 941 4688934 ~ 4700704 (+)
CI01000001_04624476_04679572 NOL4LB coding upstream 21816 4624476 ~ 4679829 (+)
CI01000001_04586080_04595939 NA coding upstream 105227 4585896 ~ 4596418 (+)
CI01000001_04567822_04568927 NA coding upstream 132385 4567464 ~ 4569260 (+)
CI01000001_04543164_04553053 COMMD7 coding upstream 147972 4542618 ~ 4553673 (+)
CI01000001_04723418_04724292 NA coding downstream 9265 4723354 ~ 4725671 (+)
CI01000001_04773238_04776581 MGC83062, GID8, GID8.L, CT011, GID8A, GID8B coding downstream 58548 4772701 ~ 4777329 (+)
CI01000001_04779079_04792659 SLC17A9B, SLC17A9 coding downstream 64784 4778937 ~ 4792827 (+)
CI01000001_04901365_04901652 NA coding downstream 187122 4901275 ~ 4902567 (+)
CI01000001_04914279_04922772 RND1B, RND1, RND1A coding downstream 199997 4914150 ~ 4923679 (+)
G15404 NA non-coding upstream 135103 4566270 ~ 4566542 (+)
G15371 NA non-coding upstream 210264 4486920 ~ 4491381 (+)
G15370 NA non-coding upstream 214846 4481838 ~ 4486799 (+)
CI01000001_04422037_04431229 NA non-coding upstream 269043 4422037 ~ 4432602 (+)
G15360 NA non-coding upstream 345029 4356216 ~ 4356616 (+)
G15395 NA non-coding downstream 39564 4753717 ~ 4758419 (+)
G15416 NA non-coding downstream 83323 4797476 ~ 4797794 (+)
G15419 NA non-coding downstream 86820 4800973 ~ 4801530 (+)
G15789 NA non-coding downstream 221218 4935371 ~ 4935990 (+)
CI01000001_03618075_03620436 NA other upstream 1080194 3618075 ~ 3621451 (+)
CI01000001_01668334_01670035 CAMK2N1B other upstream 3030641 1667762 ~ 1671167 (+)
G13051 NA other upstream 3656493 1043713 ~ 1045152 (+)
CI01000001_00483853_00488761 VWA1 other upstream 4209588 483853 ~ 488825 (+)
G12614 NA other upstream 4390704 309144 ~ 310941 (+)
G15794 NA other downstream 347065 5061218 ~ 5064704 (+)
CI01000001_05279884_05287123 NA other downstream 572596 5279837 ~ 5287698 (+)
G15995 NA other downstream 997732 5711885 ~ 5714951 (+)
CI01000001_07531945_07539781 NA other downstream 2818419 7531541 ~ 7540586 (+)
G17234 NA other downstream 3317971 8032124 ~ 8032483 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_021575 ptk6b coding NC_007134.7 CM002907.2 17387325 ~ 17404011 (+)