XLOC_021635 (camkvl)


Basic Information

Item Value
gene id XLOC_021635
gene name camkvl
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007134.7
NCBI id CM002907.2
chromosome length 46223584
location 20563779 ~ 20636740 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00042942
GATGAAAGCAGAGATTATTTATTTCtctgggggagagagagagaaggagggaGGGACAGACAGCAGCATTGCTCGCCGATAGTCTTGTCAGAAACTGCGCCGATCTAATGCGTCTCTCATAAACGCGCCATTAACAGTCGACCAAGGGCTCGCCGTCTTCAAAGTTTGGATTTCCTCATCCATCCCGTGCGTACTCTGTGCCAATCCGAGCAGGTGGATGCTGTCATGCCATTTGGGTGCCTTGCTCTGCGAGATGGGCGAACATACAACAGCCTGTCAGACATCACTGACAAATACGAGATCGGACAGGTCCTCAAGGCGAAAGAATTTTGTGAGCTGTGCCTGGTGAAGGAGCGACAGACGGACAAGGTTTATGTGTGCAAGAAATTCCTCAAGAAGGATGGCAGGAAAGTGCGGAAGGCAGCCAAGAACGAGATCATGATCTTGAAAATGGTCAAACATCCAAACATCTTGCAGCTGATTGATGCATTCGAGACCAGAAAAGAGTTCTTCATCATACAAGAGCTGGCCACAGGTGGAGATGTGTTTGACTGGATCTTAGACCAGGGTAACTACACAGAGAGAGATGCGGCCAATGTGATCCGACAGGTCCTAGAAGCTGTGGCGTACCTTCACTCCCTCAATATAGTCCACAGGAATTTAAAGCTGGAGAATTTGATGTACTACAGAGAAAGTAACCACAACAAAGTTGTGTTGCGGGATTTCTACCTGTCCAGGTTTGAGAACGGTTCGATCACCGAACCCTGTGGTACACCGGAGTATCTAGCCCCTGAAGTGGTGGCACGTCATCGCTATGGAAGACCAGTTGATTGTTGGGCAGTGGGGGTCATTATGTACATACTGTTGTCTGGAAACCCTCCATTTTATGATGAAACTGAGGAGGAAAACACTGACATGCACAACCGGATCATCTTCTGCCGCATTGTTGGTGGAGAGTTTGAGTTTGACTCGCCATACTGGGACGACATTTCTCCTGCTGCGAAAGAACTAGTCTGCAGATTTATGGAGGTCGACCAAATGCTGAGAATTACAGCACAAGATGCACTTACACATGAATGGATTGCTGGAAATGGTGCATCAGAAAAGAATTTGAAGGAAGGAGTTTGTGCTCAGTTTGAGAAAAACTTTGCAAAGGCCAAATGGAGGAAAGCAATTCGTGTCACCACATTTATGCAGCGTCTCCGAGCCACTGATATAGGATCGTCCGATGGGGCAGTGGAAGGCCAGGCCGAAGGGGTCAAAGCGGATGGATTAGATGGTAAGGGGATACAAACAGACTCAGGTGGCGTTTCTGCTGGGAGTGTGTCCCATGAGGTGTCTGTCGAAAGCAGACCCACAGAGAATCAAGAAGCAGGACAAACAAAAGTAGAAGAGAAAGAAACAGAGACTGTTGGCCAATCGAACAGCTCTTTGAAAATACAAGCAGAGGAGCCACTGAACAAGAAAGAAACTACAGAAGGCACTTCTGAAATAAAGGACAAACCAACAACAGGCGCAAACCAGAAAGCAGCATCCGTTCAGCCTATCAAAACTTCAGACAGCCGTGAGAACAGCATCCCTGTGGAGCCAGAAGCTACAACTCTTGGCAGTGTTGAGAAGAAATCACCTTTCCATGATACTCCAAATCGACGCAAGATTGCTGCCAATCTCTCAATGGATCATAGTTCATGTTCTGAAGCCAAAACTGCTACCCTATCAACAGGAAATGAACCCCCTCTTCAATCAGAAGACAAGAAAGACACAGTCCACGATATGACCGCAAGTAGCTGGTGTCAAACACAACTCCCAGAAGCAGTTGCAGAGAGGTCAGCAGAAGTTGGGGCACCTTCTGAGGTCAATCCCAAGAGCAAAGAGTTGAAGAAGGGTCGAGCAGACAAGGGTAGCCAATCGGTGAAAAACATCCAGTCAGTTTATGCAGGATTGGGATCTTCAAGTCTTGGCCAAGATCAAACTGTATTCGTGCAGGAGCTGCAGGAGATGGTCCATGGTGCATCGGGATATGGGAGTCCGTACTGTCCAACCTACTCTGTCGGGCAGTATGGAGGTCTCGATCCAGGAAGTGCAGCCAGTGCAGACTGGCAAATGGATTGCGTAATTGAACAAATTGAGAAGCAAATGGCTGCTGTGCTAGAGAAGATTGAGGGGGACATGCCTTCATTGCTGGAGCAGATCAGTGACCATCCTGAGACCCTACCAAGAGCAAAGAGTGCCAGCTCTTCCCCTTCACCTCGCCCTCGCTCATACCATCATTCGACCCCACCTCCCCTTCCCACCACCCCTCGCCCAGTAATGCCTTCTTTACCCCACCTGACCATTCCGCCCCCTTCATACCCACCACCTTCCCCACCCAGTCAAATCCAAGGTCACAGCCATCCAGCTCCCGAAGAGAGTACCAGTGATGGCCAGAAGTCTACAAAGCGGTCTGGCCAGTCACCAAGGGGAAGTGTGTCAGGAAAAGGGTTGTAAATATGCTAACAGGATGTGAACAGTCAAGAATAATGAAGGTACACTTTGTAACTGAATCTTTGGGATGTGGATTATGGATCCATTAGTACAGTATTCCTTTATGGGCTGTTCAAGTGGGCTCAAACATAAAAGAGCCTCGTTATTGATTGTATGTGATGGATAAGaagcttgtttttaaaatgtaaagaggTAAGTATCTAAGCTAGTT

Function

symbol description
camkvl Predicted to enable calmodulin binding activity and calmodulin-dependent protein kinase activity. Predicted to be involved in peptidyl-serine phosphorylation. Predicted to act upstream of or within protein phosphorylation. Is expressed in Purkinje cell.

GO:

id name namespace
GO:0018105 peptidyl-serine phosphorylation biological_process
GO:0006468 protein phosphorylation biological_process
GO:0005622 intracellular anatomical structure cellular_component
GO:0005516 calmodulin binding molecular_function
GO:0005524 ATP binding molecular_function
GO:0004672 protein kinase activity molecular_function
GO:0004674 protein serine/threonine kinase activity molecular_function
GO:0004683 calmodulin-dependent protein kinase activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-090311-58 Predicted to enable calmodulin binding activity and calmodulin-dependent protein kinase activity. Predicted to be involved in peptidyl-serine phosphorylation. Predicted to act upstream of or within protein phosphorylation. Is expressed in Purkinje cell.

Ensembl:

ensembl_id ENSDARG00000057000

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00042942 True 2695 mRNA 0.48 11 20563779 20636740

Neighbor

gene id symbol gene type direction distance location
XLOC_021634 adnpb coding upstream 33723 20518504 ~ 20530056 (+)
XLOC_021633 dpm1 coding upstream 46087 20513104 ~ 20517692 (+)
XLOC_021631 slc35c2 coding upstream 51825 20431140 ~ 20511954 (+)
XLOC_021632 CR352228.2 coding upstream 91909 20471755 ~ 20471870 (+)
XLOC_021630 tnnc2 coding upstream 136480 20422661 ~ 20427299 (+)
XLOC_021636 uba1 coding downstream 3744 20640484 ~ 20664621 (+)
XLOC_021637 arhgef3l coding downstream 32409 20669149 ~ 20684086 (+)
XLOC_021638 usp21 coding downstream 50600 20687340 ~ 20701863 (+)
XLOC_021639 ccdc30 coding downstream 69109 20705849 ~ 20730155 (+)
XLOC_021640 si:ch211-112c15.8 coding downstream 135159 20771899 ~ 20780671 (+)
XLOC_021628 NA non-coding upstream 202353 20345310 ~ 20361426 (+)
XLOC_021627 AL953864.1 non-coding upstream 376040 20187625 ~ 20187739 (+)
XLOC_021614 NA non-coding upstream 1087628 19473396 ~ 19476151 (+)
XLOC_021613 CR388168.1 non-coding upstream 1344839 19217528 ~ 19218940 (+)
XLOC_021651 NA non-coding downstream 836362 21473102 ~ 21474482 (+)
XLOC_021656 CR847529.1 non-coding downstream 986995 21623735 ~ 21623849 (+)
XLOC_021659 CR548634.2 non-coding downstream 1144837 21781577 ~ 21783450 (+)
XLOC_021660 NA non-coding downstream 1269313 21906053 ~ 21914926 (+)
XLOC_021666 NA non-coding downstream 1935418 22572158 ~ 22593289 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) G16706 NA non-coding CI01000001 null 6424442 ~ 6431183 (-)