LOC110520030 (gmpaa)


Basic Information

Item Value
gene id LOC110520030
gene name gmpaa
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 45571650 ~ 45580003 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036974274.1
CTCTTTCTGACCCGCAAAATAACTCACATTCCCATAATCCTCAGTTTTACGCGGTGACGTATTGAGCATAACAAACAACTCAGGAAGAGCATATTTGATCCAGGTTAGACAGCTACCTACACATTCAAAATGCTGAAGGCTGTGATTCTCATTGGAGGCCCGCAGAAAGGGACACGGTTTCGACCGTTGTCATTTGAGGTCCCAAAACCCTTGTTTCCAGTTGCTGGTGTGCCCATGCTACAGCATCACATTGAAGCATGTGCCAAGGTGCCAAATATGAAGGAGATTTTGCTTGTTGGCTTTTACCAGCCAAATGAAGAACTTACCAGATTCATTTGTAGCGCACAGCAGGAATTCAAAATCTTAATCAGGTATTTGCAGGAGTTTGCTGCTTTGGGCACTGGGGGCGGAATCTACCACTTCAGAGATCAGATTCTATCTGGTGGCCCAGAGGCATTCTTCATCATGAATGCTGACGTGTGCTCTGAGTTTCCTCTACCAGAGATGCTCAACTTCCAGAAAGAACACGGAGAGCCAAGCAGTTTCGTCATCATGGGGACAACTGCAAACAGAAAGCAGTCCATGAATTATGGCTGTATTGTGGAAAACCAGCAAACAAATGAGGTTTTACATTATGTGGAGAAGCCTAGCACTTTTGTTAGTGACATCATCAACTGTGGAATATACCTGTTTACCCCGGAGATCTTCCAACACATTGGGGCAGTCTTCCAGAAGAACCAGCAGGACATGCTGTTATATCCATATGAGGGAGATGAGCAGACCAATGGCAACGGCTGGCATCGGGCTGAGGCCATTCGGTTAGAACAGGACATTTTCACAGCCCTGGCTGGGCAGGGCAAGCTCTACGTCTACAAAACACCTGCCTTCTGGAGCCAGATCAAATCTGCAGGGTCTGCAATATACGCCAGTCGGTTGTACCTTAACCAGTACCATAAAACACATCCTGAAAGACTGGCTACAACTGAGGATGGAGGGCCTAGAATAAGTGGAAATGTTTACATTCACCCAACAGCCAATATTGACCCTACTGCGGTGTTGGGGCCCAACGTCTCGATAGGCACAGGAGTGACCATCGGGGCTGGGGTGCGTGTAAGAGAGTCCGTCATCCTCCACGGGGCTACCCTACAGGCAAGCAGTTGCCAGTGGCAAATGTCATTGTTTAAATTTGCCAGTTCCCCAGGCGAAAAATGCTGAAATGGCTCTTCCCTTGATAAATATAAAAATGATCACAGTTGTGTGTTGAACTGTATAGTGGGGTGGGACAGCACTATTGGCAAGTGGGCCAGAGTTGAAGGAACTCCCAGTGACCCAAATCCAAATGACCCCTATGCAAAAATAGACAGTGAAACACTCTTCAGAGATGGAAAACT
>XM_021596996.2
AAAATAACTCACATTCCCATAATCCTCAGTTTTACGCGGTGACGTATTGAGCATAACAAACAACTCAGGAAGAGCATATTTGATCCAGGTTAGACAGCTACCTACACATTCAAAATGCTGAAGGCTGTGATTCTCATTGGAGGCCCGCAGAAAGGGACACGGTTTCGACCGTTGTCATTTGAGGTCCCAAAACCCTTGTTTCCAGTTGCTGGTGTGCCCATGCTACAGCATCACATTGAAGCATGTGCCAAGGTGCCAAATATGAAGGAGATTTTGCTTGTTGGCTTTTACCAGCCAAATGAAGAACTTACCAGATTCATTTGTAGCGCACAGCAGGAATTCAAAATCTTAATCAGGTATTTGCAGGAGTTTGCTGCTTTGGGCACTGGGGGCGGAATCTACCACTTCAGAGATCAGATTCTATCTGGTGGCCCAGAGGCATTCTTCATCATGAATGCTGACGTGTGCTCTGAGTTTCCTCTACCAGAGATGCTCAACTTCCAGAAAGAACACGGAGAGCCAAGCAGTTTCGTCATCATGGGGACAACTGCAAACAGAAAGCAGTCCATGAATTATGGCTGTATTGTGGAAAACCAGCAAACAAATGAGGTTTTACATTATGTGGAGAAGCCTAGCACTTTTGTTAGTGACATCATCAACTGTGGAATATACCTGTTTACCCCGGAGATCTTCCAACACATTGGGGCAGTCTTCCAGAAGAACCAGCAGGACATGCTGTTATATCCATATGAGGGAGATGAGCAGACCAATGGCAACGGCTGGCATCGGGCTGAGGCCATTCGGTTAGAACAGGACATTTTCACAGCCCTGGCTGGGCAGGGCAAGCTCTACGTCTACAAAACACCTGCCTTCTGGAGCCAGATCAAATCTGCAGGGTCTGCAATATACGCCAGTCGGTTGTACCTTAACCAGTACCATAAAACACATCCTGAAAGACTGGCTACAACTGAGGATGGAGGGCCTAGAATAAGTGGAAATGTTTACATTCACCCAACAGCCAATATTGACCCTACTGCGGTGTTGGGGCCCAACGTCTCGATAGGCACAGGAGTGACCATCGGGGCTGGGGTGCGTGTAAGAGAGTCCGTCATCCTCCACGGGGCTACCCTACAGGATCACAGTTGTGTGTTGAACTGTATAGTGGGGTGGGACAGCACTATTGGCAAGTGGGCCAGAGTTGAAGGAACTCCCAGTGACCCAAATCCAAATGACCCCTATGCAAAAATAGACAGTGAAACACTCTTCAGAGATGGAAAACTCACACCATCAATCACCATTCTTGGTTGTAATGTGACTATCCCATCGGAGGTGATCATACTCAACTCAATTGTTCTGCCACACAAAGACCTCAACAGGAGTTTCAAAAACCAAATTATACTGTAGTTAATTTGCTGCGTTCATTTAGTGTCAAACTAATTAAGGATTGTAGCTTGAAGATCAATGTCACTGCCTCTGGGTTATTGTATAGAAGATGACACTAGGTGTTTGGAAAGATTGTAGGTTTTAGCCTTTATAAATTAAAGGATGTAAATGAGATGGTTTGGAGGATGATAGTGGGTCGGTTAGATTACCTCGACATGAATGTCATCCCGTAACTTTGAGCGGCCGCCCGCCTGTGTTTTGTTAAAAAGCTGAGGAAtgagcctggagaaatgtaaaccACTCAATttcagagctatggatgcaaccATGTTGAGGCTAGACAGTGTTTAAACATTTGCGTAAAACAAGCTTTTATTTTggattctgatggggtacgacagttgagcTAAGCACGAGGTATAAGTTAATCTTCAAGAATCAAAAGGGTGTGTGCACACAATTAAGTCAAATTGATGGAGCAACTAAAGGATTCTAATTTTACATTTCTGCACTATCCCTATGATTAGCTCTGGATTCACTACCATGTAAGGGAAATTAAAACAATGGTAATTTTGGCATAGGGTTTGGTAGCAGTACTTACCATTCATTGGTGCTAGCCTAGTTACTGAAATGTCATCTTGGAAAGAAGTGAAAGTCTGCAGCTGATCTAGTAAGATTACAAAATGAAAGGAATTGGTTTGCTGTTTAATTTTGAGGGGTAATTTGGGGGCCTTTTTACACGCGCTTTGATTAAAACATGACAATTAATTGCAAGCGTTTACATTCTGAAAGAAATGACTGCCTCATGTTTTTGGTTAAAGGGGCAAGCAGTAGTTCGAAATAAGTGGCAACCTTGCCCGTTTTGGTAaatagctgagggatggggctgttGAACTCTACCacttcaaattcatagacagcgctagggatgcaaggactgaccaaccATGAGATAAAGTTTAACCTTGAGGCTAGTGTTTGTCCAAAAATGAATGTACCAATTGCAATCAAGAAATGTTTGCTTTCAATTTGAACATGGCAGGGAACTTAGATTCGGGGCTGTAGGAGAGATTTACTTTAATGAGTAGCCATTGATTCTGTACATGTGACAATCAAATGGGAGATTGTTACCCAGTATAAAATTGTTGCTGCATGCCTAATTTGCTTCAAAATCAAGCACTccttgttttaaaaaaataaaataaaaacttttaactaaa
>XM_021596997.2
AAAATAACTCACATTCCCATAATCCTCAGTTTTACGCGGTGACGTATTGAGCATAACAAACAACTCAGGAAGAGCATATTTGATCCAGGTTAGACAGCTACCTACACATTCAAAATGCTGAAGGCTGTGATTCTCATTGGAGGCCCGCAGAAAGGGACACGGTTTCGACCGTTGTCATTTGAGGTCCCAAAACCCTTGTTTCCAGTTGCTGGTGTGCCCATGCTACAGCATCACATTGAAGCATGTGCCAAGGTGCCAAATATGAAGGAGATTTTGCTTGTTGGCTTTTACCAGCCAAATGAAGAACTTACCAGATTCATTTGTAGCGCACAGCAGGAATTCAAAATCTTAATCAGGTATTTGCAGGAGTTTGCTGCTTTGGGCACTGGGGGCGGAATCTACCACTTCAGAGATCAGATTCTATCTGGTGGCCCAGAGGCATTCTTCATCATGAATGCTGACGTGTGCTCTGAGTTTCCTCTACCAGAGATGCTCAACTTCCAGAAAGAACACGGAGAGCCAAGCAGTTTCGTCATCATGGGGACAACTGCAAACAGAAAGCAGTCCATGAATTATGGCTGTATTGTGGAAAACCAGCAAACAAATGAGGTTTTACATTATGTGGAGAAGCCTAGCACTTTTGTTAGTGACATCATCAACTGTGGAATATACCTGTTTACCCCGGAGATCTTCCAACACATTGGGGCAGTCTTCCAGAAGAACCAGCAGGACATGCTGTTAGATGAGCAGACCAATGGCAACGGCTGGCATCGGGCTGAGGCCATTCGGTTAGAACAGGACATTTTCACAGCCCTGGCTGGGCAGGGCAAGCTCTACGTCTACAAAACACCTGCCTTCTGGAGCCAGATCAAATCTGCAGGGTCTGCAATATACGCCAGTCGGTTGTACCTTAACCAGTACCATAAAACACATCCTGAAAGACTGGCTACAACTGAGGATGGAGGGCCTAGAATAAGTGGAAATGTTTACATTCACCCAACAGCCAATATTGACCCTACTGCGGTGTTGGGGCCCAACGTCTCGATAGGCACAGGAGTGACCATCGGGGCTGGGGTGCGTGTAAGAGAGTCCGTCATCCTCCACGGGGCTACCCTACAGGATCACAGTTGTGTGTTGAACTGTATAGTGGGGTGGGACAGCACTATTGGCAAGTGGGCCAGAGTTGAAGGAACTCCCAGTGACCCAAATCCAAATGACCCCTATGCAAAAATAGACAGTGAAACACTCTTCAGAGATGGAAAACTCACACCATCAATCACCATTCTTGGTTGTAATGTGACTATCCCATCGGAGGTGATCATACTCAACTCAATTGTTCTGCCACACAAAGACCTCAACAGGAGTTTCAAAAACCAAATTATACTGTAGTTAATTTGCTGCGTTCATTTAGTGTCAAACTAATTAAGGATTGTAGCTTGAAGATCAATGTCACTGCCTCTGGGTTATTGTATAGAAGATGACACTAGGTGTTTGGAAAGATTGTAGGTTTTAGCCTTTATAAATTAAAGGATGTAAATGAGATGGTTTGGAGGATGATAGTGGGTCGGTTAGATTACCTCGACATGAATGTCATCCCGTAACTTTGAGCGGCCGCCCGCCTGTGTTTTGTTAAAAAGCTGAGGAAtgagcctggagaaatgtaaaccACTCAATttcagagctatggatgcaaccATGTTGAGGCTAGACAGTGTTTAAACATTTGCGTAAAACAAGCTTTTATTTTggattctgatggggtacgacagttgagcTAAGCACGAGGTATAAGTTAATCTTCAAGAATCAAAAGGGTGTGTGCACACAATTAAGTCAAATTGATGGAGCAACTAAAGGATTCTAATTTTACATTTCTGCACTATCCCTATGATTAGCTCTGGATTCACTACCATGTAAGGGAAATTAAAACAATGGTAATTTTGGCATAGGGTTTGGTAGCAGTACTTACCATTCATTGGTGCTAGCCTAGTTACTGAAATGTCATCTTGGAAAGAAGTGAAAGTCTGCAGCTGATCTAGTAAGATTACAAAATGAAAGGAATTGGTTTGCTGTTTAATTTTGAGGGGTAATTTGGGGGCCTTTTTACACGCGCTTTGATTAAAACATGACAATTAATTGCAAGCGTTTACATTCTGAAAGAAATGACTGCCTCATGTTTTTGGTTAAAGGGGCAAGCAGTAGTTCGAAATAAGTGGCAACCTTGCCCGTTTTGGTAaatagctgagggatggggctgttGAACTCTACCacttcaaattcatagacagcgctagggatgcaaggactgaccaaccATGAGATAAAGTTTAACCTTGAGGCTAGTGTTTGTCCAAAAATGAATGTACCAATTGCAATCAAGAAATGTTTGCTTTCAATTTGAACATGGCAGGGAACTTAGATTCGGGGCTGTAGGAGAGATTTACTTTAATGAGTAGCCATTGATTCTGTACATGTGACAATCAAATGGGAGATTGTTACCCAGTATAAAATTGTTGCTGCATGCCTAATTTGCTTCAAAATCAAGCACTccttgttttaaaaaaataaaataaaaacttttaactaaa

Function

NR:

description
mannose-1-phosphate guanyltransferase alpha-A-like isoform X2

GO:

id name namespace
GO:0009058 biosynthetic process biological_process
GO:0016779 nucleotidyltransferase activity molecular_function

KEGG:

id description
K00966 GMPP; mannose-1-phosphate guanylyltransferase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036974274.1 False 1391 mRNA 0.47 12 45571650 45578326
XM_021596996.2 False 2603 mRNA 0.43 13 45571665 45580003
XM_021596997.2 True 2588 mRNA 0.43 12 45571665 45580003

Neighbor

gene id symbol gene type direction distance location
pnkd pnkd coding upstream 10268 45549912 ~ 45561382 (+)
dars1 sydc coding upstream 32352 45509465 ~ 45539298 (+)
LOC110520024 cxcr4 coding upstream 69511 45500138 ~ 45502139 (+)
LOC118956876 NA coding upstream 75670 45494309 ~ 45495980 (+)
glsb LOC106586143 coding upstream 172149 45340329 ~ 45399501 (+)
asic4a LOC106586149 coding downstream 146234 45726237 ~ 45823301 (+)
LOC110504149 wnt6 coding downstream 272179 45852182 ~ 45884194 (+)
LOC110520033 LOC106586153 coding downstream 323662 45903665 ~ 45933022 (+)
LOC110520034 LOC106586154 coding downstream 428196 46008199 ~ 46010647 (+)
LOC118957146 NA coding downstream 452762 46032765 ~ 46043845 (+)
G262852 NA non-coding upstream 83270 45400277 ~ 45488380 (+)
G262875 NA non-coding upstream 236284 45335127 ~ 45335366 (+)
G262827 NA non-coding upstream 317202 45254197 ~ 45254448 (+)
G262820 NA non-coding upstream 328559 45242850 ~ 45243091 (+)
G262814 NA non-coding upstream 344266 45227173 ~ 45227384 (+)
G263331 NA non-coding downstream 11250 45591253 ~ 45591539 (+)
G263362 NA non-coding downstream 37135 45617138 ~ 45617349 (+)
G263372 NA non-coding downstream 42995 45622998 ~ 45623306 (+)
G263376 NA non-coding downstream 44274 45624277 ~ 45624493 (+)
G263399 NA non-coding downstream 64190 45644193 ~ 45644394 (+)
G262037 NA other upstream 1046242 44520419 ~ 44525408 (+)
G261749 NA other upstream 1319099 44252069 ~ 44252551 (+)
LOC110519969 LOC106586020 other upstream 5119470 40440040 ~ 40452542 (+)
LOC110519960 LOC106586058 other upstream 5903562 39658753 ~ 39668297 (+)
G254816 NA other upstream 6727094 38843510 ~ 38844556 (+)
G263547 LOC106586150 other downstream 258918 45838921 ~ 45839480 (+)
G263710 NA other downstream 354116 45934119 ~ 45934418 (+)
G263733 LOC106586158 other downstream 495481 46075484 ~ 46079425 (+)
G263859 LOC107588258 other downstream 604131 46184134 ~ 46184804 (+)
LOC110520046 LOC106586167 other downstream 1251005 46801058 ~ 46832288 (+)

Expression


Co-expression Network