G263372


Basic Information

Item Value
gene id G263372
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 45622998 ~ 45623306 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU299488
taaataatttagcctaaaatgacatacccaaatctaactgcttgtagctcaggccctgaagcaaggatatgcatattcttgataccatttgaaaggaaacactttgaagttggtGGAAATGTGAacgaatgtaggagaatataagaaaggccataatgtattattccagtccATTTGCAATTTAGActgtggccactagatggcagtagtgtatgtgcaacgttttagactgatccaatgaaacattgcatttctgttcaaaatgttgtatcaagactgcccaaatgtgcctaattggtttattaataa

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU299488 True 309 lncRNA 0.36 1 45622998 45623306

Neighbor

gene id symbol gene type direction distance location
LOC110520030 gmpaa coding upstream 42995 45571650 ~ 45580003 (+)
pnkd pnkd coding upstream 61616 45549912 ~ 45561382 (+)
dars1 sydc coding upstream 83700 45509465 ~ 45539298 (+)
LOC110520024 cxcr4 coding upstream 120859 45500138 ~ 45502139 (+)
LOC118956876 NA coding upstream 127018 45494309 ~ 45495980 (+)
asic4a LOC106586149 coding downstream 102931 45726237 ~ 45823301 (+)
LOC110504149 wnt6 coding downstream 228876 45852182 ~ 45884194 (+)
LOC110520033 LOC106586153 coding downstream 280359 45903665 ~ 45933022 (+)
LOC110520034 LOC106586154 coding downstream 384893 46008199 ~ 46010647 (+)
LOC118957146 NA coding downstream 409459 46032765 ~ 46043845 (+)
G263362 NA non-coding upstream 5649 45617138 ~ 45617349 (+)
G263331 NA non-coding upstream 31459 45591253 ~ 45591539 (+)
G262852 NA non-coding upstream 134618 45400277 ~ 45488380 (+)
G262875 NA non-coding upstream 287632 45335127 ~ 45335366 (+)
G262827 NA non-coding upstream 368550 45254197 ~ 45254448 (+)
G263376 NA non-coding downstream 971 45624277 ~ 45624493 (+)
G263399 NA non-coding downstream 20887 45644193 ~ 45644394 (+)
G263453 NA non-coding downstream 66164 45689470 ~ 45689858 (+)
G263516 NA non-coding downstream 202377 45825683 ~ 45830272 (+)
G263549 NA non-coding downstream 210329 45833635 ~ 45833881 (+)
G262037 NA other upstream 1097590 44520419 ~ 44525408 (+)
G261749 NA other upstream 1370447 44252069 ~ 44252551 (+)
LOC110519969 LOC106586020 other upstream 5170818 40440040 ~ 40452542 (+)
LOC110519960 LOC106586058 other upstream 5954910 39658753 ~ 39668297 (+)
G254816 NA other upstream 6778442 38843510 ~ 38844556 (+)
G263547 LOC106586150 other downstream 215615 45838921 ~ 45839480 (+)
G263710 NA other downstream 310813 45934119 ~ 45934418 (+)
G263733 LOC106586158 other downstream 452178 46075484 ~ 46079425 (+)
G263859 LOC107588258 other downstream 560828 46184134 ~ 46184804 (+)
LOC110520046 LOC106586167 other downstream 1207702 46801058 ~ 46832288 (+)

Expression


Co-expression Network