LOC118944674


Basic Information

Item Value
gene id LOC118944674
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 50044718 ~ 50063834 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036964928.1
ATGACACAGATTGGTGGTGTGTTCAGCTTCCCCCTGCTGGAGGCTCACGAGGAGGCGCTGGAGCCACTTCTTCACCGCTCCACAGTCCTCACCGCTCCACAGTCCTCATCGCTCCACAGTCCTCACCGCTCCACAGTCCTCACCGCTCCACAGTCCTCACCGCTCCACAGTCCTCACCGCTCCACAGTCCTCATCGCTCCACAGTCCTCACCGCTCCACAGTCCTCATCGCTCCACAGTCCTCATCGCTCCAAGGTCCTCACCGCTCCACAGTCCTCACCGCTCCACAGTCCTCACCGCTCCACAGTCCTCATCGCTCCACAGTCCTCATCGCTCCACAGTCCTCATCGCTCCAAGGTCCTCACCGCTCCAAGGTCCTCATCGCTCCAAGGTCCTCACCGCTCCACAGTCCTCACCGCTGCACAGTCCTCATCGCTCCAAGGTCCTCACCGCTCCGCAGTCCTCACCGCTCCGCAGTCCTCACCGCTCCACGGTCCTCATCGCTCCAAGGTCCTCACCGCTCCACAGTCCTCACCGCTCCACAGTCCTCACCGCTCCACAATCCTCATCGCTCCAAGGTCCTCACCGCTCCGCAGTCCTCACCACTCCACAGTCCTCACCGCTCCGCAGTCCTCACCGCTCCACAGTCCTCACCGCTCCACAGTCCTCACCGCTCCACAGTCCTCATCGCTCCAAGGTCCTCACCGCTCCGCAGTCCTCACCACTCCACAGTCCTCACCGCTCCGCAGTCCTCACCGCTCCACAGTCCTCACCGCTCCACAGTCCTCACCGCTCCACAGTCCTCATCGCTCCACAGTCCTCATCGCTCCACAGTCCTCATCGCTCCAAGGTCCTCACCGCTCCAAGGTCCTCATCGCTCCAAGGTCCTCACCGCTCCACAGTCCTCACCGCTGCACAGTCCTCATCGCTCCAAGGTCCTCACCGCTCCGCAGTCCTCACCGCTCCGCAGTCCTCACCGCTCCACGGTCCTCATCGCTCCAAGGTCCTCACCGCTCCACAGTCCTCACCGCTCCACAGTCCTCACCGCTCCACAATCCTCATCGCTCCAAGGTCCTCACCGCTCCGCAGTCCTCACCACTCCACAGTCCTCACCGCTCCGCAGTCCTCACCGCTCCACAGTCCTCACCGCTCCACAGTCCTCACCGCTCCACAGTCCTCATCGCTCCAAGGTCCTCACCGCTCCGCAGTCCTCACCACTCCACAGTCCTCACCGCTCCGCAGTCCTCACCGCTCCACAGTCCTCACCGCTCCACAGTCCTCACCGCTCCACAGTCCTCATTTCTAA

Function

NR:

description
uncharacterized protein DKFZp434B061-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036964928.1 True 1305 mRNA 0.63 2 50044718 50063834

Neighbor

gene id symbol gene type direction distance location
LOC110504188 scrn3 coding upstream 170501 49871807 ~ 49874217 (+)
LOC110520117 LOC106586239 coding upstream 178720 49862239 ~ 49865998 (+)
LOC118959582 NA coding upstream 277362 49757817 ~ 49767356 (+)
cdca7a LOC106586236 coding upstream 309256 49731876 ~ 49735462 (+)
zak LOC106586235 coding upstream 312781 49676929 ~ 49731937 (+)
hoxd13a hoxd13aa coding downstream 70861 50134695 ~ 50136597 (+)
hoxd12a hoxd12 coding downstream 75379 50139213 ~ 50141004 (+)
hoxd11a hoxd11aa coding downstream 80821 50144655 ~ 50146492 (+)
hoxd10a hoxd10 coding downstream 82977 50146811 ~ 50153227 (+)
hoxd9a hoxd9aa coding downstream 92001 50155835 ~ 50158848 (+)
G268620 NA non-coding upstream 1175 50043333 ~ 50043543 (+)
G268618 NA non-coding upstream 8695 50035823 ~ 50036023 (+)
G267615 NA non-coding upstream 58554 49985951 ~ 49986164 (+)
G267551 atp5g2 non-coding upstream 62950 49979216 ~ 49981768 (+)
G267608 atf2 non-coding upstream 67953 49975726 ~ 49976765 (+)
G268604 NA non-coding downstream 20276 50084110 ~ 50085157 (+)
G268714 NA non-coding downstream 38945 50102779 ~ 50103056 (+)
G268877 NA non-coding downstream 168637 50232471 ~ 50232690 (+)
G268956 NA non-coding downstream 228851 50292685 ~ 50292893 (+)
G267529 NA other upstream 189216 49836617 ~ 49855502 (+)
G267381 NA other upstream 488880 49554498 ~ 49555838 (+)
G267358 NA other upstream 532243 49510803 ~ 49512475 (+)
LOC110520046 LOC106586167 other upstream 3212474 46801058 ~ 46832288 (+)
G263859 LOC107588258 other upstream 3859914 46184134 ~ 46184804 (+)
hoxd3a hoxd3 other downstream 98467 50162278 ~ 50184327 (+)
LOC110520146 ino80d other downstream 538468 50601983 ~ 50618761 (+)
G269291 rap2a other downstream 834755 50898589 ~ 50900277 (+)
LOC110520169 il1rl1 other downstream 1510146 51573980 ~ 51582567 (+)
acvr2aa LOC106586327 other downstream 3103118 53124656 ~ 53172428 (+)

Expression


Co-expression Network