Gene
RNA
| Item | Value |
|---|---|
| gene id | G258538 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 42016740 ~ 42017023 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU294332 | True | 257 | lncRNA | 0.40 | 2 | 42016740 | 42017023 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110519974 | LOC106586063 | coding | upstream | 51499 | 41922501 ~ 41965278 (+) |
| spegb | LOC106586064 | coding | upstream | 101418 | 41786953 ~ 41915322 (+) |
| LOC110519972 | sdpr | coding | upstream | 249128 | 41740090 ~ 41767612 (+) |
| LOC110519971 | tmeff2 | coding | upstream | 290985 | 41554471 ~ 41725755 (+) |
| LOC118944668 | NA | coding | upstream | 1155560 | 40858297 ~ 40861180 (+) |
| LOC110519977 | csn8 | coding | downstream | 158858 | 42175881 ~ 42205548 (+) |
| LOC110519976 | LOC100194537 | coding | downstream | 179443 | 42196466 ~ 42198481 (+) |
| LOC110519988 | LOC106586103 | coding | downstream | 444514 | 42461537 ~ 42534154 (+) |
| LOC110519991 | cssa25h2orf47 | coding | downstream | 526598 | 42543621 ~ 42550621 (+) |
| pgap1 | pgap1 | coding | downstream | 545117 | 42562140 ~ 42590366 (+) |
| G258447 | NA | non-coding | upstream | 166509 | 41850004 ~ 41850231 (+) |
| G258446 | LOC106608106 | non-coding | upstream | 166977 | 41849351 ~ 41849763 (+) |
| G258445 | NA | non-coding | upstream | 167749 | 41848731 ~ 41848991 (+) |
| G258444 | NA | non-coding | upstream | 169368 | 41847082 ~ 41847372 (+) |
| G258539 | NA | non-coding | downstream | 2229 | 42019252 ~ 42070212 (+) |
| G258650 | NA | non-coding | downstream | 210643 | 42227666 ~ 42227968 (+) |
| G258657 | NA | non-coding | downstream | 216082 | 42233105 ~ 42233311 (+) |
| G258664 | NA | non-coding | downstream | 224840 | 42241863 ~ 42242082 (+) |
| G258682 | NA | non-coding | downstream | 307448 | 42324471 ~ 42327172 (+) |
| LOC110519969 | LOC106586020 | other | upstream | 1564560 | 40440040 ~ 40452542 (+) |
| LOC110519960 | LOC106586058 | other | upstream | 2348652 | 39658753 ~ 39668297 (+) |
| G254816 | NA | other | upstream | 3172184 | 38843510 ~ 38844556 (+) |
| G254445 | NA | other | upstream | 3415874 | 38600487 ~ 38600866 (+) |
| G254204 | NA | other | upstream | 3575006 | 38441166 ~ 38441734 (+) |
| G261749 | NA | other | downstream | 2235046 | 44252069 ~ 44252551 (+) |
| G262037 | NA | other | downstream | 2503396 | 44520419 ~ 44525408 (+) |
| G263547 | LOC106586150 | other | downstream | 3821898 | 45838921 ~ 45839480 (+) |
| G263710 | NA | other | downstream | 3917096 | 45934119 ~ 45934418 (+) |
| G263733 | LOC106586158 | other | downstream | 4058461 | 46075484 ~ 46079425 (+) |
