XLOC_002210 (BX120005.2)


Basic Information

Item Value
gene id XLOC_002210
gene name BX120005.2
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007121.7
NCBI id CM002894.2
chromosome length 45420867
location 29840725 ~ 29848513 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00004243
ACAAGCGCGCAGAATGGAGATCAAACAAGCCTTTGTTATTCACTTTCTCATGTTGATCGCAGCAGGTTTAAGAGAATGTTTGGCGACAAAGTTCATTGCAGTAGTAGAAGGAGACACTCTGGTATTGAAATGCCCTCGAAGAAACCTCAGTGATAACGTGCATATGGAGTGGAGAAAAGAAGGCCATGTTATGTTCTTTAACACGCACAAAGGTCTAAAGGATCCAAGGATCAACCTTTTTACTTCGAACAGCTTTGAATTTACCGTAGTAGTGTCAAACGTAACATTTAAAGATGAAGGACTTTATAGATGTTTCGTCTATGAAGATCAAGTCTCTACAAAAAGATTTAAAGTAAAGGTTTTGGGATCTCCAAAAATAGATATGACTGAGCATGAGGGTAAAGCAGTCATCAAATGTACAACGGCAGCGAATGGCCACCCACCTAAACTCTCATGGCAAATTGGTGGTGTTGAAGTTGAAGCTGTACCCAATACCTGGCTGGAGGAAAGATCAAATAGGACGTTCGCAGTTAGCATCTTAACAATCAAAACCCATATCAGAGAAGCAACAGTGAAGTGCTTGGCGAAACACAGAGagcttcaaaataaagtgatgaACTTCATCATCATTCAAAATCACTCTATTATATCTTCAACCACTTCGATTTATTCTACTAGAGATGACCTAAAAACCGAAACAATGATCACAGCCACTTCTCCTCCTGTCATCAGCAGTACAACCCCTGTGGAACTATCGTCAATTTCAGAAAGTACTGGAGTGTTTGCAACAGAAGACACTACCTCAAAAAGTATACAAGTGGAAGAGCATTCTACAGAATTCGATATAAGCTTGACAAcACATGACATAACCTCTTCAGAGTCCAATTCTACTGATGGATTCTTGACAAACAATAGCACTAATATACAAGATGATGGGGATAAAGACAGACAATACAATCAAAAGAAAAGCTCACCACTGCTGATCCTGCTGGTCACAACCCTTATCATCTGTTTGCTTATTGTAGTCATCTTCTTCCTGATAAGATTGCGAAAGACTCATATAGCCTGGAAAAAAgAGAATGAAGAATCGGACCAGTCTGTGGAAAGCAGCAAATCGAAAGCAAGTCATGAAGAAAAGCAGGCCCATGATAGGAGAAGACCAGGTTTTTGGAACTCAAACTTTACAGTATACAAAGTAGAAGAACCTCCTCAAAACACCACAGTTTCAGTCGCTACAATAGATGTGATCAACGAAGCACAAGACAATTCCAAAACGGCTTGTAACCAACAGGACAAAGCTTGTGTCAAGGAGACTGAACTTTAGAGGAACGTTGAATCCTCAAAACCCTGAACTGATTTTGCAGTTCTGTTATGAACTATGGTGCTAACTCACTTAGCCTGTTTCTGTGAACATTAAAGCTGATAGCTGCCGACTTTTGTATGTAATGTACAGTGTACTgtatatccttttttttttaactgttgaaggtttacattattttttatacagaATGTAAATAAgagtttattttataatgtttgctTTGTTATGTGTTTACAATAATTTGATAACCATAAAATGGTTCCTTGATAAAATTGAAATGTACTGCCatggtattttattattatagattaatAATGAGGAATGTTAAATTGGTGCTGCTCTGTTCtgttttcaataaaacatttaataaggc

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000089327

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00004243 True 1697 mRNA 0.38 12 29840725 29848513

Neighbor

gene id symbol gene type direction distance location
XLOC_002209 h2ax1 coding upstream 23136 29816681 ~ 29817589 (+)
XLOC_002208 hyou1 coding upstream 49259 29770120 ~ 29791466 (+)
XLOC_002206 dlg2 coding upstream 135216 29431529 ~ 29705509 (+)
XLOC_002207 BX470178.1 coding upstream 367269 29473342 ~ 29473456 (+)
XLOC_002205 FP102896.1 coding upstream 507550 29333059 ~ 29333175 (+)
XLOC_002211 hspa8 coding downstream 984 29849497 ~ 29887864 (+)
XLOC_002212 BX120005.5 coding downstream 2059 29850572 ~ 29850667 (+)
XLOC_002213 BX120005.4 coding downstream 2487 29851000 ~ 29851095 (+)
XLOC_002214 BX120005.1 coding downstream 3634 29852147 ~ 29852242 (+)
XLOC_002215 NA coding downstream 45113 29893626 ~ 29911696 (+)
XLOC_002201 NA non-coding upstream 749124 29091237 ~ 29091601 (+)
XLOC_002199 NA non-coding upstream 1385640 28442909 ~ 28455085 (+)
XLOC_002196 CU207388.1 non-coding upstream 1587930 28252678 ~ 28252795 (+)
XLOC_002217 BX957285.1 non-coding downstream 887635 30736148 ~ 30736268 (+)

Expression


Co-expression Network