XLOC_002196 (CU207388.1)


Basic Information

Item Value
gene id XLOC_002196
gene name CU207388.1
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007121.7
NCBI id CM002894.2
chromosome length 45420867
location 28252678 ~ 28252795 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00004217
actgctggcagctagctctcagCATCTCTTACATGGTcatccactgaagctaagcagtgctgcgccaggtcagtacctggatgagagaccacatgggaaaactaggttgcttacggaa

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000081078

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00004217 True 118 rRNA 0.52 1 28252678 28252795

Neighbor

gene id symbol gene type direction distance location
XLOC_002195 NA coding upstream 6258 28203764 ~ 28246420 (+)
XLOC_002194 rnft1 coding upstream 83509 28160265 ~ 28169169 (+)
XLOC_002193 NA coding upstream 1053696 27169126 ~ 27198982 (+)
XLOC_002192 cxadr coding upstream 1094438 27096043 ~ 27158240 (+)
XLOC_002191 ehd1b coding upstream 1159644 27068251 ~ 27093034 (+)
XLOC_002197 ptrh2 coding downstream 53954 28306749 ~ 28309317 (+)
XLOC_002198 si:ch211-222e20.4 coding downstream 175427 28428222 ~ 28431809 (+)
XLOC_002199 NA coding downstream 190114 28442909 ~ 28455085 (+)
XLOC_002200 cblb coding downstream 334651 28587446 ~ 28733002 (+)
XLOC_002201 NA coding downstream 838442 29091237 ~ 29091601 (+)
XLOC_002190 NA non-coding upstream 1188273 27061761 ~ 27064405 (+)
XLOC_002181 NA non-coding upstream 1369539 26882702 ~ 26883139 (+)
XLOC_002175 NA non-coding upstream 1465893 26786369 ~ 26786785 (+)
XLOC_002205 FP102896.1 non-coding downstream 1080264 29333059 ~ 29333175 (+)
XLOC_002207 BX470178.1 non-coding downstream 1220547 29473342 ~ 29473456 (+)
XLOC_002212 BX120005.5 non-coding downstream 1597777 29850572 ~ 29850667 (+)

Expression


Co-expression Network