XLOC_002193


Basic Information

Item Value
gene id XLOC_002193
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007121.7
NCBI id CM002894.2
chromosome length 45420867
location 27169126 ~ 27198982 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00005904
CTGACTGTTGACTTTATGGATCACCAAGGACCAGTTTCggataaaagaaaaacattgacATCCTGGAAGATCTAAGGGGTTTTTCCTGTTTGACGGCCTTCATTGTTTGCATGCCTGTGGTTCTGCTCATAACCAGCCCGACCGGCTCTCAGATGAGAACAGCAGCGCCACACCCTCCACTGCACCTGTCCTCTTCCCAGCTGCTCTTCTCTTCGTGGGTTGCCAGATCCCACCCCGCCACATCAGCCTTTCGGGTTTGTAGGAAGAGCTTTGCTGCCATCTGCTGCTATCAGCAGGATTAAGGTCTACAAGGCTCCTGGAGCAGTGTGCATGGGTGAGGTCCCAGCAGACAGCAGCACAGCTCATTATCCCGAGG

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00005904 True 376 lncRNA 0.53 3 27169126 27198982

Neighbor

gene id symbol gene type direction distance location
XLOC_002192 cxadr coding upstream 10886 27096043 ~ 27158240 (+)
XLOC_002191 ehd1b coding upstream 76092 27068251 ~ 27093034 (+)
XLOC_002190 NA coding upstream 104721 27061761 ~ 27064405 (+)
XLOC_002189 wdr74 coding upstream 110140 27052642 ~ 27058986 (+)
XLOC_002188 BX248510.6 coding upstream 125962 27021164 ~ 27043164 (+)
XLOC_002194 rnft1 coding downstream 961283 28160265 ~ 28169169 (+)
XLOC_002195 NA coding downstream 1004782 28203764 ~ 28246420 (+)
XLOC_002196 CU207388.1 coding downstream 1053696 28252678 ~ 28252795 (+)
XLOC_002197 ptrh2 coding downstream 1107767 28306749 ~ 28309317 (+)
XLOC_002198 si:ch211-222e20.4 coding downstream 1229240 28428222 ~ 28431809 (+)
XLOC_002181 NA non-coding upstream 285987 26882702 ~ 26883139 (+)
XLOC_002175 NA non-coding upstream 382341 26786369 ~ 26786785 (+)
XLOC_002174 CR545465.1 non-coding upstream 397449 26766385 ~ 26771677 (+)
XLOC_002167 NA non-coding upstream 539844 26628793 ~ 26629282 (+)
XLOC_002199 NA non-coding downstream 1243927 28442909 ~ 28455085 (+)
XLOC_002201 NA non-coding downstream 1892255 29091237 ~ 29091601 (+)
XLOC_002205 FP102896.1 non-coding downstream 2134077 29333059 ~ 29333175 (+)

Expression


Co-expression Network