G264985


Basic Information

Item Value
gene id G264985
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 46959666 ~ 46960010 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU301199
gataagatatgcatagatttggatagaaagattgtagatttggatagaaaacactctgaagtttctaaaactgtttgaatcatgtctgtgagtataacagaacttatgtagcaggtgaaacccagaggaaaaaccattcagattatttttttgaggtcactctcttttcaatgagttttAATTGGGAATCcaatttctaagggaccttcttgcacttcctaccgcttccactggatgtcaccagtctttagaaattggttgaggtttttcctttgtgtaatgaagaagtagccatgttcaaaacgagggtcacttcaagtgtactgtttgttagaggcgcgtgac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU301199 True 345 lncRNA 0.38 1 46959666 46960010

Neighbor

gene id symbol gene type direction distance location
LOC110520046 LOC106586167 coding upstream 127378 46801058 ~ 46832288 (+)
LOC110520045 LOC106586166 coding upstream 182274 46724055 ~ 46777392 (+)
LOC110504152 LOC106586162 coding upstream 415371 46458590 ~ 46544295 (+)
LOC110520040 LOC106586160 coding upstream 517865 46341848 ~ 46441801 (+)
LOC118957146 NA coding upstream 915821 46032765 ~ 46043845 (+)
LOC110504153 gpd2 coding downstream 60985 47020995 ~ 47027946 (+)
LOC110520048 LOC106586169 coding downstream 158718 47118728 ~ 47133302 (+)
LOC110520055 cg057 coding downstream 285484 47245494 ~ 47255098 (+)
LOC110520054 LOC106586173 coding downstream 296154 47256164 ~ 47259319 (+)
LOC110520056 LOC106586174 coding downstream 355207 47315217 ~ 47441923 (+)
G264259 NA non-coding upstream 42330 46916418 ~ 46917336 (+)
G264255 NA non-coding upstream 49007 46910390 ~ 46910659 (+)
G264230 NA non-coding upstream 92607 46866837 ~ 46867059 (+)
G264229 NA non-coding upstream 94106 46865344 ~ 46865560 (+)
G264067 NA non-coding upstream 342260 46576728 ~ 46617406 (+)
G265131 LOC106586170 non-coding downstream 183560 47143570 ~ 47144441 (+)
G265135 NA non-coding downstream 185138 47145148 ~ 47145451 (+)
G265137 NA non-coding downstream 185927 47145937 ~ 47146332 (+)
G265140 LOC106586171 non-coding downstream 199532 47159542 ~ 47159776 (+)
G265142 NA non-coding downstream 202070 47162080 ~ 47162296 (+)
G263859 LOC107588258 other upstream 774862 46184134 ~ 46184804 (+)
G263733 LOC106586158 other upstream 880241 46075484 ~ 46079425 (+)
G263710 NA other upstream 1025248 45934119 ~ 45934418 (+)
G263547 LOC106586150 other upstream 1120186 45838921 ~ 45839480 (+)
G267358 NA other downstream 2550793 49510803 ~ 49512475 (+)
G267381 NA other downstream 2594488 49554498 ~ 49555838 (+)
G267529 NA other downstream 2876607 49836617 ~ 49855502 (+)
hoxd3a hoxd3 other downstream 3202291 50162278 ~ 50184327 (+)
LOC110520146 ino80d other downstream 3642292 50601983 ~ 50618761 (+)

Expression


Co-expression Network