Gene
RNA
| Item | Value |
|---|---|
| gene id | G266822 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 48551932 ~ 48552271 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: tetratricopeptide repeat protein 21B isoform X2 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU303198 | True | 340 | lncRNA | 0.46 | 1 | 48551932 | 48552271 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110520075 | LOC106586196 | coding | upstream | 43093 | 48455210 ~ 48508839 (+) |
| LOC118958193 | NA | coding | upstream | 522235 | 48028238 ~ 48029697 (+) |
| LOC110520067 | LOC106586186 | coding | upstream | 524847 | 47981052 ~ 48027085 (+) |
| LOC110520066 | LOC106586185 | coding | upstream | 575094 | 47971973 ~ 47976838 (+) |
| LOC110520065 | LOC106586184 | coding | upstream | 603904 | 47929321 ~ 47948028 (+) |
| LOC110520076 | LOC106586200 | coding | downstream | 10380 | 48562651 ~ 48577839 (+) |
| LOC110520080 | LOC106581709 | coding | downstream | 92839 | 48645110 ~ 48667115 (+) |
| LOC110520081 | LOC106581793 | coding | downstream | 119769 | 48672040 ~ 48795272 (+) |
| LOC110520083 | LOC106586203 | coding | downstream | 274164 | 48826435 ~ 48857045 (+) |
| LOC110520084 | g6pc2 | coding | downstream | 319837 | 48872108 ~ 48876243 (+) |
| LOC110504158 | LOC106903880 | non-coding | upstream | 1989 | 48542999 ~ 48563667 (+) |
| G266699 | NA | non-coding | upstream | 158410 | 48376214 ~ 48393522 (+) |
| G266690 | NA | non-coding | upstream | 182981 | 48368550 ~ 48368951 (+) |
| G266682 | NA | non-coding | upstream | 196401 | 48353412 ~ 48355531 (+) |
| G266639 | NA | non-coding | upstream | 236928 | 48314795 ~ 48315004 (+) |
| G266831 | NA | non-coding | downstream | 8699 | 48560970 ~ 48561184 (+) |
| G266938 | NA | non-coding | downstream | 222307 | 48774578 ~ 48774943 (+) |
| G266941 | NA | non-coding | downstream | 225244 | 48777515 ~ 48780502 (+) |
| G267031 | LOC106586206 | non-coding | downstream | 382482 | 48934753 ~ 48935482 (+) |
| LOC110520046 | LOC106586167 | other | upstream | 1719688 | 46801058 ~ 46832288 (+) |
| G263859 | LOC107588258 | other | upstream | 2367128 | 46184134 ~ 46184804 (+) |
| G263733 | LOC106586158 | other | upstream | 2472507 | 46075484 ~ 46079425 (+) |
| G263710 | NA | other | upstream | 2617514 | 45934119 ~ 45934418 (+) |
| G263547 | LOC106586150 | other | upstream | 2712452 | 45838921 ~ 45839480 (+) |
| G267358 | NA | other | downstream | 958532 | 49510803 ~ 49512475 (+) |
| G267381 | NA | other | downstream | 1002227 | 49554498 ~ 49555838 (+) |
| G267529 | NA | other | downstream | 1284346 | 49836617 ~ 49855502 (+) |
| hoxd3a | hoxd3 | other | downstream | 1610030 | 50162278 ~ 50184327 (+) |
| LOC110520146 | ino80d | other | downstream | 2050031 | 50601983 ~ 50618761 (+) |
